RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 FLOT1O75955 427 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 GNA11P29992 359 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PPATQ06203 517 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 ZRSR1Q15695 479 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 RBM46Q8TBY0 533 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 ERCC4Q92889 916 aaPredicted RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 C12orf42Q96LP6 360 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 SLF1Q9BQI6 1058 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 AMNQ9BXJ7 453 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 SPTLC3Q9NUV7 552 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 HOOK1Q9UJC3 728 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PARP14Q460N5 1801 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 M0R2N6 131 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 IRF6O14896 467 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 TAL1P17542 331 aaPredicted RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 ATP2B1P20020 1258 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 ADCY7P51828 1080 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 NCAPHQ15003 741 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PPP1R18Q6NYC8 613 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PRPF38AQ8NAV1 312 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 CNNM3Q8NE01 707 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 RANBP17Q9H2T7 1088 aaKnown RBP17.43■□□□□ 0.38
PPM1F-202ENST00000397495 KCNF1Q9H3M0 494 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PCDHA6Q9UN73 950 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 PCDHA8Q9Y5H6 950 aa17.43■□□□□ 0.38
PPM1F-202ENST00000397495 ESYT2A0FGR8 921 aa17.42■□□□□ 0.38
PPM1F-202ENST00000397495 ATP2C1P98194 919 aaPredicted RBP17.42■□□□□ 0.38
PPM1F-202ENST00000397495 GRIN1Q05586 938 aa17.42■□□□□ 0.38
PPM1F-202ENST00000397495 CHADLQ6NUI6 762 aa17.42■□□□□ 0.38
PPM1F-202ENST00000397495 AOPEPQ8N6M6 819 aa17.42■□□□□ 0.38
PPM1F-202ENST00000397495 KIAA1524Q8TCG1 905 aa17.42■□□□□ 0.38
PPM1F-202ENST00000397495 OPTNQ96CV9 577 aa17.42■□□□□ 0.38
PPM1F-202ENST00000397495 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
PPM1F-202ENST00000397495 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
PPM1F-202ENST00000397495 TTC38Q5R3I4 469 aa17.41■□□□□ 0.38
PPM1F-202ENST00000397495 TRIML1Q8N9V2 468 aa17.41■□□□□ 0.38
PPM1F-202ENST00000397495 SLC10A4Q96EP9 437 aa17.41■□□□□ 0.38
PPM1F-202ENST00000397495 BIN2Q9UBW5 565 aaPredicted RBP17.41■□□□□ 0.38
PPM1F-202ENST00000397495 CCDC194A0A1B0GVG4 234 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
PPM1F-202ENST00000397495 C2orf69Q8N8R5 385 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 CUL5Q93034 780 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
PPM1F-202ENST00000397495 CSRNP2Q9H175 543 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 TMEM260Q9NX78 707 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 RLFQ13129 1914 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 A0A087WWV3 80 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 ACTN4O43707 911 aaKnown RBP17.4■□□□□ 0.38
PPM1F-202ENST00000397495 ITGBL1O95965 494 aaPredicted RBP17.4■□□□□ 0.38
PPM1F-202ENST00000397495 PPIL2Q13356 520 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 UBE2SQ16763 222 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
PPM1F-202ENST00000397495 JAKMIP3Q5VZ66 844 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
PPM1F-202ENST00000397495 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 PCDHA5Q9Y5H7 936 aa17.4■□□□□ 0.38
PPM1F-202ENST00000397495 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.38
PPM1F-202ENST00000397495 FKBP1BP68106 108 aa17.39■□□□□ 0.37
PPM1F-202ENST00000397495 PNOCQ13519 176 aa17.39■□□□□ 0.37
PPM1F-202ENST00000397495 NOLC1Q14978 699 aaKnown RBP eCLIP17.39■□□□□ 0.37
PPM1F-202ENST00000397495 TREML2Q5T2D2 321 aa17.39■□□□□ 0.37
PPM1F-202ENST00000397495 SH3RF1Q7Z6J0 888 aa17.39■□□□□ 0.37
PPM1F-202ENST00000397495 SPC24Q8NBT2 197 aa17.39■□□□□ 0.37
PPM1F-202ENST00000397495 COL11A1P12107 1806 aaPredicted RBP17.39■□□□□ 0.37
PPM1F-202ENST00000397495 LOC285556D6RIA3 1793 aa17.39■□□□□ 0.37
PPM1F-202ENST00000397495 A0A0G2JLL6 359 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-202ENST00000397495 CXCL11O14625 94 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 POLR2DO15514 142 aaKnown RBP17.38■□□□□ 0.37
PPM1F-202ENST00000397495 NEMFO60524 1076 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 MRPL12P52815 198 aaKnown RBP17.38■□□□□ 0.37
PPM1F-202ENST00000397495 POSTNQ15063 836 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 CATSPERGQ6ZRH7 1159 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 CCDC186Q7Z3E2 898 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 PRRT2Q7Z6L0 340 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-202ENST00000397495 CPXCR1Q8N123 301 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 WNT7AO00755 349 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 GJA5P36382 358 aa17.38■□□□□ 0.37
PPM1F-202ENST00000397495 TPM4P67936 248 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms