RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 MTIF3Q9H2K0 278 aaKnown RBP14.09□□□□□ -0.15
SYNE4-203ENST00000397428 YBX2Q9Y2T7 364 aaKnown RBP14.09□□□□□ -0.15
SYNE4-203ENST00000397428 VCANP13611 3396 aa14.09□□□□□ -0.15
SYNE4-203ENST00000397428 CDH23Q9H251 3354 aa14.09□□□□□ -0.15
SYNE4-203ENST00000397428 CHD7Q9P2D1 2997 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 NFIBO00712 420 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
SYNE4-203ENST00000397428 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 OTOP2Q7RTS6 562 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 POLR3EQ9NVU0 708 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 PNMA2Q9UL42 364 aa14.08□□□□□ -0.16
SYNE4-203ENST00000397428 LCTP09848 1927 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 REV3LO60673 3130 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 SUPT20HL2P0C7V6 817 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 PDE1AP54750 535 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
SYNE4-203ENST00000397428 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 MCMDC2Q4G0Z9 681 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 ANKRD45Q5TZF3 282 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 ASB2Q96Q27 587 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 NKX2-4Q9H2Z4 354 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 SLC4A7Q9Y6M7 1214 aa14.07□□□□□ -0.16
SYNE4-203ENST00000397428 A6NJR5 290 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 TNFRSF10AO00220 468 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 KPNA6O60684 536 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 SNHG28P0DPA3 235 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 HSPD1P10809 573 aaKnown RBP14.06□□□□□ -0.16
SYNE4-203ENST00000397428 PDHBP11177 359 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 EDNRBP24530 442 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 CPT1AP50416 773 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 RNF207Q6ZRF8 634 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 RGS22Q8NE09 1264 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 FAM227BQ96M60 508 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 MTG1Q9BT17 334 aaPredicted RBP14.06□□□□□ -0.16
SYNE4-203ENST00000397428 TRMT13Q9NUP7 481 aaKnown RBP14.06□□□□□ -0.16
SYNE4-203ENST00000397428 SPTBN5Q9NRC6 3674 aaKnown RBP14.06□□□□□ -0.16
SYNE4-203ENST00000397428 TRANK1O15050 2925 aa14.06□□□□□ -0.16
SYNE4-203ENST00000397428 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 NKRFO15226 690 aaKnown RBP eCLIP14.05□□□□□ -0.166e-6■■□□□ 11.7
SYNE4-203ENST00000397428 PFKMP08237 780 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 PCP11498 1178 aaKnown RBP14.05□□□□□ -0.16
SYNE4-203ENST00000397428 CYP2C9P11712 490 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 POU3F3P20264 500 aaPredicted RBP14.05□□□□□ -0.16
SYNE4-203ENST00000397428 RABGGTBP53611 331 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 RRP12Q5JTH9 1297 aaKnown RBP14.05□□□□□ -0.16
SYNE4-203ENST00000397428 DNERQ8NFT8 737 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 SCLYQ96I15 445 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 MAF1Q9H063 256 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 TNKSO95271 1327 aa14.05□□□□□ -0.16
SYNE4-203ENST00000397428 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
SYNE4-203ENST00000397428 GBF1Q92538 1859 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 A0A0D9SFI3 127 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 MYOGP15173 224 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 IGFBP4P22692 258 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 CALML3P27482 149 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 RPS6P62753 249 aaKnown RBP14.04□□□□□ -0.16
SYNE4-203ENST00000397428 MRPS5P82675 430 aaKnown RBP14.04□□□□□ -0.16
SYNE4-203ENST00000397428 PTPN11Q06124 597 aaPredicted RBP14.04□□□□□ -0.16
SYNE4-203ENST00000397428 HDAC1Q13547 482 aaPredicted RBP14.04□□□□□ -0.16
SYNE4-203ENST00000397428 TTLL4Q14679 1199 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 CCDC85BQ15834 202 aaPredicted RBP14.04□□□□□ -0.16
SYNE4-203ENST00000397428 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 SLC30A10Q6XR72 485 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 GPHNQ9NQX3 736 aaPredicted RBP14.04□□□□□ -0.16
SYNE4-203ENST00000397428 TOMM22Q9NS69 142 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 ZMYM6O95789 1325 aa14.04□□□□□ -0.16
SYNE4-203ENST00000397428 MYL3P08590 195 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
SYNE4-203ENST00000397428 RFC2P35250 354 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 PDE4DQ08499 809 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 CCDC62Q6P9F0 684 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 OR6J1Q8NGC5 347 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
SYNE4-203ENST00000397428 WDR19Q8NEZ3 1342 aa14.03□□□□□ -0.16
SYNE4-203ENST00000397428 B4DLN1 442 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 IQCF3P0C7M6 154 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 TXNP10599 105 aaKnown RBP14.02□□□□□ -0.17
SYNE4-203ENST00000397428 MRPL12P52815 198 aaKnown RBP14.02□□□□□ -0.17
SYNE4-203ENST00000397428 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
SYNE4-203ENST00000397428 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.17
SYNE4-203ENST00000397428 ZNF589Q86UQ0 364 aaPredicted RBP14.02□□□□□ -0.17
SYNE4-203ENST00000397428 DGKHQ86XP1 1220 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 PHOSPHO2Q8TCD6 241 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 ANKS1AQ92625 1134 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 COPS5Q92905 334 aa14.02□□□□□ -0.17
SYNE4-203ENST00000397428 MPHOSPH6Q99547 160 aaKnown RBP14.02□□□□□ -0.17
SYNE4-203ENST00000397428 BMP1P13497 986 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms