RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SPICE1Q8N0Z3 855 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 IGSF22Q8N9C0 903 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 MAGEF1Q9HAY2 307 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 DHX8Q14562 1220 aaKnown RBP13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 VSTM4Q8IW00 320 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 LRRC15Q8TF66 581 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 KBTBD4Q9NVX7 518 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 DDX25Q9UHL0 483 aaKnown RBP13.67□□□□□ -0.22
ITGB1-202ENST00000396033 MYL1P05976 194 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
ITGB1-202ENST00000396033 FKBP1CQ5VVH2 108 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 PPP4R3AQ6IN85 833 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 ARMCX5Q6P1M9 558 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 CDAN1Q8IWY9 1227 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 LRWD1Q9UFC0 647 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 ZBTB21Q9ULJ3 1066 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 ECE1P42892 770 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 21.4
ITGB1-202ENST00000396033 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 TPD52L1Q16890 204 aaPredicted RBP13.67□□□□□ -0.22
ITGB1-202ENST00000396033 RAB34Q9BZG1 259 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 SYNPO2Q9UMS6 1093 aa13.67□□□□□ -0.22
ITGB1-202ENST00000396033 USH1GQ495M9 461 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 FBXO11Q86XK2 927 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 MAP7D2Q96T17 732 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 GDAQ9Y2T3 454 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 PAK1Q13153 545 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 MMTAG2Q9BU76 263 aaKnown RBP13.66□□□□□ -0.22
ITGB1-202ENST00000396033 MARCH6O60337 910 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
ITGB1-202ENST00000396033 CBX1P83916 185 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 FAM83AQ86UY5 434 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 ACER1Q8TDN7 264 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
ITGB1-202ENST00000396033 POTEMA6NI47 508 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 WNT10BO00744 389 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 NRDCO43847 1150 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 COBLO75128 1261 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 NBPF9Q3BBW0 867 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 CDK5RAP3Q96JB5 506 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
ITGB1-202ENST00000396033 MYOZ2Q9NPC6 264 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 MYH7BA7E2Y1 1941 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 KCNB1Q14721 858 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 NELFBQ8WX92 580 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
ITGB1-202ENST00000396033 SHTN1A0MZ66 631 aa13.65□□□□□ -0.23
ITGB1-202ENST00000396033 BTNL9Q6UXG8 535 aa13.65□□□□□ -0.23
ITGB1-202ENST00000396033 ZBED3Q96IU2 234 aaPredicted RBP13.65□□□□□ -0.23
ITGB1-202ENST00000396033 MAPK8IP1Q9UQF2 711 aa13.65□□□□□ -0.23
ITGB1-202ENST00000396033 TMX2Q9Y320 296 aa13.65□□□□□ -0.23
ITGB1-202ENST00000396033 NFKBIEO00221 500 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 KLRC4O43908 158 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
ITGB1-202ENST00000396033 STAT2P52630 851 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 CDKAL1Q5VV42 579 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 CCDC125Q86Z20 511 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.64□□□□□ -0.23
ITGB1-202ENST00000396033 PRR12Q9ULL5 1215 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 TBC1D12O60347 775 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 TAL1P17542 331 aaPredicted RBP13.64□□□□□ -0.23
ITGB1-202ENST00000396033 TNIP1Q15025 636 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 SNX29Q8TEQ0 813 aa13.64□□□□□ -0.23
ITGB1-202ENST00000396033 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
ITGB1-202ENST00000396033 C16orf45Q96MC5 204 aaPredicted RBP13.64□□□□□ -0.23
ITGB1-202ENST00000396033 BRCA1P38398 1863 aaKnown RBP13.64□□□□□ -0.23
ITGB1-202ENST00000396033 MEIS2O14770 477 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 PRCPP42785 496 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 ASIC1P78348 528 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 AMPD3Q01432 767 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 GRB10Q13322 594 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 PDIA5Q14554 519 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 KIAA1755Q5JYT7 1200 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 FAM83BQ5T0W9 1011 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 KRT79Q5XKE5 535 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
ITGB1-202ENST00000396033 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms