RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 FAM126BQ8IXS8 530 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 KRT23Q9C075 422 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 KAT14Q9H8E8 782 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 JMJD4Q9H9V9 463 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 MTMR10Q9NXD2 777 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 COL20A1Q9P218 1284 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 Q9Y3F1 56 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 PTPDC1A2A3K4 754 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 ARVCFO00192 962 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 OPLAHO14841 1288 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 CD4P01730 458 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 ASPRV1Q53RT3 343 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 CXCL17Q6UXB2 119 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 RNF207Q6ZRF8 634 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 RGS22Q8NE09 1264 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 MTMR8Q96EF0 704 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 GLT1D1Q96MS3 346 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 CNNM2Q9H8M5 875 aa18.94■□□□□ 0.62
CXCL12-206ENST00000395795 A0A0U1RQG5 324 aaPredicted RBP18.93■□□□□ 0.62
CXCL12-206ENST00000395795 DYNC1LI2O43237 492 aaPredicted RBP18.93■□□□□ 0.62
CXCL12-206ENST00000395795 PPP1R11O60927 126 aaPredicted RBP18.93■□□□□ 0.62
CXCL12-206ENST00000395795 CALML3P27482 149 aa18.93■□□□□ 0.62
CXCL12-206ENST00000395795 FSCN1Q16658 493 aaKnown RBP18.93■□□□□ 0.62
CXCL12-206ENST00000395795 QRICH1Q2TAL8 776 aa18.93■□□□□ 0.62
CXCL12-206ENST00000395795 DUSP28Q4G0W2 176 aa18.93■□□□□ 0.62
CXCL12-206ENST00000395795 DEFB123Q8N688 67 aa18.93■□□□□ 0.62
CXCL12-206ENST00000395795 TMEM39AQ9NV64 488 aa18.93■□□□□ 0.62
CXCL12-206ENST00000395795 ADD3Q9UEY8 706 aaKnown RBP18.93■□□□□ 0.62
CXCL12-206ENST00000395795 PNMA2Q9UL42 364 aa18.93■□□□□ 0.62
CXCL12-206ENST00000395795 PALM3A6NDB9 673 aaPredicted RBP18.92■□□□□ 0.62
CXCL12-206ENST00000395795 ANTXR2P58335 489 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 USH1GQ495M9 461 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 KIAA1211Q6ZU35 1233 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 C16orf59Q7L2K0 433 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 SKAP1Q86WV1 359 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 MAP4K1Q92918 833 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 SPC25Q9HBM1 224 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 MAD2L2Q9UI95 211 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 COL6A3P12111 3177 aa18.92■□□□□ 0.62
CXCL12-206ENST00000395795 LAMA2P24043 3122 aaKnown RBP18.91■□□□□ 0.62
CXCL12-206ENST00000395795 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
CXCL12-206ENST00000395795 TIMP1P01033 207 aa18.91■□□□□ 0.62
CXCL12-206ENST00000395795 PARP1P09874 1014 aaKnown RBP18.91■□□□□ 0.62
CXCL12-206ENST00000395795 FAM109BQ6ICB4 259 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-206ENST00000395795 DNERQ8NFT8 737 aa18.91■□□□□ 0.62
CXCL12-206ENST00000395795 SYTL5Q8TDW5 730 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-206ENST00000395795 WDR11Q9BZH6 1224 aa18.91■□□□□ 0.62
CXCL12-206ENST00000395795 E7EWF7 191 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 ARIH2O95376 493 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 RAG1P15918 1043 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 GHRHRQ02643 423 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 IFIT1BQ5T764 474 aaKnown RBP18.9■□□□□ 0.62
CXCL12-206ENST00000395795 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
CXCL12-206ENST00000395795 VWCEQ96DN2 955 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 GUCD1Q96NT3 240 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 TAAR1Q96RJ0 339 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 UBAC1Q9BSL1 405 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 MAF1Q9H063 256 aa18.9■□□□□ 0.62
CXCL12-206ENST00000395795 PSMC6P62333 389 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 TROAPQ12815 778 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 CCDC62Q6P9F0 684 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
CXCL12-206ENST00000395795 RUFY2Q8WXA3 655 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 COPS5Q92905 334 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 LSG1Q9H089 658 aaKnown RBP18.89■□□□□ 0.61
CXCL12-206ENST00000395795 AP5M1Q9H0R1 490 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
CXCL12-206ENST00000395795 ABCB11O95342 1321 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 MROH7Q68CQ1 1323 aa18.89■□□□□ 0.61
CXCL12-206ENST00000395795 KLRF2D3W0D1 207 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 CYTH3O43739 400 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 CABYRO75952 493 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 FPGSQ05932 587 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 ITGA7Q13683 1181 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 GRM4Q14833 912 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 MFSD5Q6N075 450 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 IGDCC4Q8TDY8 1250 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 VAT1LQ9HCJ6 419 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 GPHNQ9NQX3 736 aaPredicted RBP18.88■□□□□ 0.61
CXCL12-206ENST00000395795 UMODL1Q5DID0 1318 aa18.88■□□□□ 0.61
CXCL12-206ENST00000395795 PURAQ00577 322 aaKnown RBP18.87■□□□□ 0.61
CXCL12-206ENST00000395795 RASIP1Q5U651 963 aa18.87■□□□□ 0.61
CXCL12-206ENST00000395795 CHST3Q7LGC8 479 aa18.87■□□□□ 0.61
CXCL12-206ENST00000395795 FBXO11Q86XK2 927 aa18.87■□□□□ 0.61
CXCL12-206ENST00000395795 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
CXCL12-206ENST00000395795 RIOX1Q9H6W3 641 aa18.87■□□□□ 0.61
CXCL12-206ENST00000395795 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
CXCL12-206ENST00000395795 SCN10AQ9Y5Y9 1956 aa18.87■□□□□ 0.61
CXCL12-206ENST00000395795 B4GALT4O60513 344 aa18.86■□□□□ 0.61
CXCL12-206ENST00000395795 HSD17B4P51659 736 aa18.86■□□□□ 0.61
CXCL12-206ENST00000395795 PDE4DQ08499 809 aa18.86■□□□□ 0.61
CXCL12-206ENST00000395795 TMEM240Q5SV17 173 aa18.86■□□□□ 0.61
CXCL12-206ENST00000395795 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.86■□□□□ 0.61
CXCL12-206ENST00000395795 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
CXCL12-206ENST00000395795 TTYH1Q9H313 450 aaPredicted RBP18.86■□□□□ 0.61
CXCL12-206ENST00000395795 STXBP5LQ9Y2K9 1186 aa18.86■□□□□ 0.61
CXCL12-206ENST00000395795 A6NJR5 290 aa18.85■□□□□ 0.61
CXCL12-206ENST00000395795 IFIT3O14879 490 aaKnown RBP18.85■□□□□ 0.61
CXCL12-206ENST00000395795 ZBTB5O15062 677 aa18.85■□□□□ 0.61
CXCL12-206ENST00000395795 CSF2RAP15509 400 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms