RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 GPATCH4Q5T3I0 446 aaKnown RBP20.1■□□□□ 0.81
SREBF1-204ENST00000395756 SIAH1Q8IUQ4 282 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 LARGE2Q8N3Y3 721 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 CUL5Q93034 780 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 CALML4Q96GE6 196 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 CCDC17Q96LX7 622 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 SRRTQ9BXP5 876 aaKnown RBP20.1■□□□□ 0.81
SREBF1-204ENST00000395756 DHX36Q9H2U1 1008 aaKnown RBP20.1■□□□□ 0.81
SREBF1-204ENST00000395756 KANSL2Q9H9L4 492 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 LAD1O00515 517 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 SMARCA1P28370 1054 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 CASP14P31944 242 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 STK4Q13043 487 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 CDKAL1Q5VV42 579 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 MIGA2Q7L4E1 593 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 SLC39A2Q9NP94 309 aa20.1■□□□□ 0.81
SREBF1-204ENST00000395756 SOWAHDA6NJG2 315 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 KCNJ18B7U540 433 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 KCNJ12Q14500 433 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 C7orf43Q8WVR3 580 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 KBTBD4Q9NVX7 518 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 RWDD2AQ9UIY3 292 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 MYO1BO43795 1136 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 PRPHP41219 470 aa20.09■□□□□ 0.81
SREBF1-204ENST00000395756 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
SREBF1-204ENST00000395756 TBX2Q13207 712 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-204ENST00000395756 DDX25Q9UHL0 483 aaKnown RBP20.09■□□□□ 0.81
SREBF1-204ENST00000395756 KLRC4O43908 158 aa20.08■□□□□ 0.81
SREBF1-204ENST00000395756 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-204ENST00000395756 SNX29Q8TEQ0 813 aa20.08■□□□□ 0.81
SREBF1-204ENST00000395756 RGS17Q9UGC6 210 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-204ENST00000395756 CDK5RAP2Q96SN8 1893 aa20.08■□□□□ 0.81
SREBF1-204ENST00000395756 AKR1B15C9JRZ8 316 aaPredicted RBP20.08■□□□□ 0.8
SREBF1-204ENST00000395756 RAD51AP2Q09MP3 1159 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 TMEM139Q8IV31 216 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 TRIM9Q9C026 710 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 RIC8AQ9NPQ8 531 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 EXOC1Q9NV70 894 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 SERPINA10Q9UK55 444 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 ECE1P42892 770 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 UBXN1Q04323 297 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 CAMKK2Q96RR4 588 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 IDI2Q9BXS1 227 aa20.08■□□□□ 0.8
SREBF1-204ENST00000395756 GTPBP4Q9BZE4 634 aaKnown RBP20.08■□□□□ 0.8
SREBF1-204ENST00000395756 ZNF215Q9UL58 517 aaPredicted RBP20.08■□□□□ 0.8
SREBF1-204ENST00000395756 PLIN4Q96Q06 1357 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 TMEM266Q2M3C6 531 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 TCP11X2Q5H9J9 407 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 CCDC84Q86UT8 332 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-204ENST00000395756 ADSSL1Q8N142 457 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 SLX4Q8IY92 1834 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 A0A0U1RQJ8 604 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 FXR1P51114 621 aaKnown RBP eCLIP20.07■□□□□ 0.8
SREBF1-204ENST00000395756 RBM26Q5T8P6 1007 aaKnown RBP20.07■□□□□ 0.8
SREBF1-204ENST00000395756 ATRIPQ8WXE1 791 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 MTMR9Q96QG7 549 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
SREBF1-204ENST00000395756 ESYT2A0FGR8 921 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 RNF225M0QZC1 329 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-204ENST00000395756 PSMD14O00487 310 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 NDUFB10O96000 172 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 HOXA13P31271 388 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-204ENST00000395756 GTF2F1P35269 517 aaKnown RBP eCLIP20.06■□□□□ 0.81e-8■■■■■ 169.5
SREBF1-204ENST00000395756 COPB1P53618 953 aaKnown RBP20.06■□□□□ 0.8
SREBF1-204ENST00000395756 KCNK18Q7Z418 384 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 AK8Q96MA6 479 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 CTAGE1Q96RT6 745 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 EHD4Q9H223 541 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.06■□□□□ 0.8
SREBF1-204ENST00000395756 A0A1W2PRG0 241 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 ARHGAP6O43182 974 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 GRB10Q13322 594 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 TTLL6Q8N841 843 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 ANKRD20A12PQ8NF67 263 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 LZTFL1Q9NQ48 299 aa20.06■□□□□ 0.8
SREBF1-204ENST00000395756 PSDA5PKW4 1024 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-204ENST00000395756 PSMA7O14818 248 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 DPEP1P16444 411 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 CACNB1Q02641 598 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-204ENST00000395756 STIM1Q13586 685 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 GPIHBP1Q8IV16 184 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 IRX2Q9BZI1 471 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-204ENST00000395756 LTBP1Q14766 1721 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 LRRC41Q15345 812 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 ECM1Q16610 540 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 KRT79Q5XKE5 535 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 CC2D2BQ6DHV5 1058 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 SV2BQ7L1I2 683 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 TBC1D7Q9P0N9 293 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 COL11A2P13942 1736 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-204ENST00000395756 STAT3P40763 770 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 IRF2BP1Q8IU81 584 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 OGFOD1Q8N543 542 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 CSGALNACT2Q8N6G5 542 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 PNMA5Q96PV4 448 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 PCDHA12Q9UN75 941 aa20.05■□□□□ 0.8
SREBF1-204ENST00000395756 NKRFO15226 690 aaKnown RBP eCLIP20.04■□□□□ 0.82e-7■□□□□ 9.5
SREBF1-204ENST00000395756 DLGAP5Q15398 846 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms