RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 LUC7L2Q9Y383 392 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 TIMM22Q9Y584 194 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SART1O43290 800 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 MAP3K6O95382 1288 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 PHKA1P46020 1223 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NRLP54845 237 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CCNA1P78396 465 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SKOR1P84550 965 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NCOA4Q13772 614 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 TEAD4Q15561 434 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NAIF1Q69YI7 327 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 RETSATQ6NUM9 610 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 INTS8Q75QN2 995 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 SIX5Q8N196 739 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CHST13Q8NET6 341 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 KIAA1524Q8TCG1 905 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CRELD1Q96HD1 420 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 HIC2Q96JB3 615 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 MFSD14AQ96MC6 490 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 PI4K2AQ9BTU6 479 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 STIM2Q9P246 746 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 KIF3AQ9Y496 699 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 A6NNZ2 444 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 AP3B2Q13367 1082 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 EPM2AIP1Q7L775 607 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 SH3RF1Q7Z6J0 888 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SLC9B2Q86UD5 537 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CCDC84Q86UT8 332 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 KRT222Q8N1A0 295 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 ESX1Q8N693 406 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 UTP14AQ9BVJ6 771 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 ABCB6Q9NP58 842 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 JAG2Q9Y219 1238 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NOD1Q9Y239 953 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CRYL1Q9Y2S2 319 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SLC4A4Q9Y6R1 1079 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 PHLDB1Q86UU1 1377 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ZSCAN5CA6NGD5 496 aaPredicted RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 CTNND1O60716 968 aaKnown RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 SSBP05455 408 aaKnown RBP eCLIP4.76□□□□□ -1.65
HERC4-204ENST00000395198 ATP1A3P13637 1013 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 TPD52P55327 224 aaPredicted RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 YBEYP58557 167 aaPredicted RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 RCN1Q15293 331 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 PDCD2Q16342 344 aaPredicted RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 TLDC1Q6P9B6 456 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 KDELC1Q6UW63 502 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ATP11CQ8NB49 1132 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 CCDC148Q8NFR7 591 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 SLC35B4Q969S0 331 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 PHACTR1Q9C0D0 580 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 LIN28AQ9H9Z2 209 aaKnown RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 CD93Q9NPY3 652 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ST7Q9NRC1 585 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 HOMER3Q9NSC5 361 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 SGSM2O43147 1006 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ZBTB24O43167 697 aaPredicted RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 RNGTTO60942 597 aaKnown RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 CYP11A1P05108 521 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 C17orf67Q0P5P2 114 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 TUSC1Q2TAM9 212 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 DSTYKQ6XUX3 929 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 DBX2Q6ZNG2 339 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 PLEKHM2Q8IWE5 1019 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 FAM169BQ8N8A8 192 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 EYA1Q99502 592 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 MTRQ99707 1265 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 CPSF2Q9P2I0 782 aaKnown RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 GGT7Q9UJ14 662 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 TTLL3Q9Y4R7 772 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ABCC8Q09428 1581 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ZBTB43O43298 467 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 FAM13AO94988 1023 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 STAMBPO95630 424 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 CPP00450 1065 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 CHMLP26374 656 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 RWDD2BP57060 319 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 NLRP5P59047 1200 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 MPP3Q13368 585 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 TTC31Q49AM3 519 aaPredicted RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 MEI1Q5TIA1 1274 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 TTLL5Q6EMB2 1281 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 SPATC1Q76KD6 591 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 UTP15Q8TED0 518 aaKnown RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 CRACR2AQ9BSW2 395 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 WNT5BQ9H1J7 359 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 ACAD9Q9H845 621 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 CAAP1Q9H8G2 361 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 MCM9Q9NXL9 1143 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 AIPL1Q9NZN9 384 aa4.76□□□□□ -1.65
HERC4-204ENST00000395198 AGO2Q9UKV8 859 aaKnown RBP4.76□□□□□ -1.65
HERC4-204ENST00000395198 GRIN3BO60391 1043 aa4.75□□□□□ -1.65
HERC4-204ENST00000395198 BRINP1O60477 761 aa4.75□□□□□ -1.65
HERC4-204ENST00000395198 COL9A1P20849 921 aa4.75□□□□□ -1.65
HERC4-204ENST00000395198 TNNT3P45378 269 aaPredicted RBP4.75□□□□□ -1.65
HERC4-204ENST00000395198 SMTNP53814 917 aa4.75□□□□□ -1.65
HERC4-204ENST00000395198 MAP3K9P80192 1104 aa4.75□□□□□ -1.65
HERC4-204ENST00000395198 GOLGA2Q08379 1002 aa4.75□□□□□ -1.65
HERC4-204ENST00000395198 ITKQ08881 620 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms