RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 MTA3Q9BTC8 594 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 TRAPPC10P48553 1259 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 GPBP1Q86WP2 473 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 TBC1D5Q92609 795 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 IL17AQ16552 155 aa17.77■□□□□ 0.43
SMARCD1-202ENST00000394963 DHX36Q9H2U1 1008 aaKnown RBP17.77■□□□□ 0.43
SMARCD1-202ENST00000394963 ZNF215Q9UL58 517 aaPredicted RBP17.77■□□□□ 0.43
SMARCD1-202ENST00000394963 TSG101Q99816 390 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 MACROD2A1Z1Q3 448 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 TBCAO75347 108 aaKnown RBP17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 NCAPHQ15003 741 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 ANKRD13CQ8N6S4 541 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 LARP4BQ92615 738 aaKnown RBP17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 CAPZA3Q96KX2 299 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 PIM2Q9P1W9 311 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 TUBE1Q9UJT0 475 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 LUC7L2Q9Y383 392 aaKnown RBP17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 IKBKBO14920 756 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 POTEIP0CG38 1075 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 SLC35G1Q2M3R5 365 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 SYCP3Q8IZU3 236 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 PODXL2Q9NZ53 605 aa17.76■□□□□ 0.43
SMARCD1-202ENST00000394963 AKR1B10O60218 316 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 KIF5CO60282 957 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 USP8P40818 1118 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 CTAGE1Q96RT6 745 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 PLEKHA4Q9H4M7 779 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 PLSCR1O15162 318 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 STAT2P52630 851 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 RCAN1P53805 252 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 STK4Q13043 487 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 CTTNQ14247 550 aaKnown RBP17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 KRT31Q15323 416 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 SYDE2Q5VT97 1194 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 NUDT12Q9BQG2 462 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 PYM1Q9BRP8 204 aaKnown RBP17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 TESPA1A2RU30 521 aaPredicted RBP17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 ELF2Q15723 593 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 SKIDA1Q1XH10 827 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 DACT2Q5SW24 774 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 TMEM179Q6ZVK1 233 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 ACRBPQ8NEB7 543 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 ENOX1Q8TC92 643 aaKnown RBP17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 TJP1Q07157 1748 aa17.75■□□□□ 0.43
SMARCD1-202ENST00000394963 RASA3Q14644 834 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 CIAPIN1Q6FI81 312 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 PRIMPOLQ96LW4 560 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 CARD6Q9BX69 1037 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 FAM198AQ9UFP1 575 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 TFR2Q9UP52 801 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 COL4A1P02462 1669 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 SPEF2Q9C093 1822 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 MYH13Q9UKX3 1938 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 IBSPP21815 317 aaPredicted RBP17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 SMCR8Q8TEV9 937 aaPredicted RBP17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 CCPG1Q9ULG6 757 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 HHIPL2Q6UWX4 724 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 PPP1R13BQ96KQ4 1090 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 SPZ1Q9BXG8 430 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
SMARCD1-202ENST00000394963 CCDC175P0C221 793 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 COPB1P53618 953 aaKnown RBP17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 TOGARAM2Q6ZUX3 1019 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 VSTM4Q8IW00 320 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 DDX12PQ92771 950 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 EIF2AK2P19525 551 aaKnown RBP17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 SYCP1Q15431 976 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 ERMNQ8TAM6 284 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 ZMYND12Q9H0C1 365 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 EPC1Q9H2F5 836 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 ONECUT3O60422 494 aaPredicted RBP17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 RNASE9P60153 205 aaKnown RBP17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 SARM1Q6SZW1 724 aa17.73■□□□□ 0.43
SMARCD1-202ENST00000394963 CLIC2O15247 247 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 GCNT3O95395 438 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 DPYDQ12882 1025 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 SPP2Q13103 211 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 MYRIPQ8NFW9 859 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 ZNF70Q9UC06 446 aaPredicted RBP17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 GLI3P10071 1580 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 SPAG1Q07617 926 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 ZNF658Q5TYW1 1059 aaPredicted RBP17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 TUBGCP2Q9BSJ2 902 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 BHMT2Q9H2M3 363 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms