RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ALDH8A1Q9H2A2 487 aaPredicted RBP24.96■■□□□ 1.59
TRAF4-203ENST00000394925 RANBP17Q9H2T7 1088 aaKnown RBP24.96■■□□□ 1.59
TRAF4-203ENST00000394925 ADD3Q9UEY8 706 aaKnown RBP24.96■■□□□ 1.59
TRAF4-203ENST00000394925 PCDHB15Q9Y5E8 787 aa24.96■■□□□ 1.59
TRAF4-203ENST00000394925 ZBBXA8MT70 800 aa24.95■■□□□ 1.58
TRAF4-203ENST00000394925 MX1P20591 662 aa24.95■■□□□ 1.58
TRAF4-203ENST00000394925 ALDH5A1P51649 535 aaPredicted RBP24.95■■□□□ 1.58
TRAF4-203ENST00000394925 DUSP28Q4G0W2 176 aa24.95■■□□□ 1.58
TRAF4-203ENST00000394925 VPS53Q5VIR6 699 aa24.95■■□□□ 1.58
TRAF4-203ENST00000394925 WDR11Q9BZH6 1224 aa24.95■■□□□ 1.58
TRAF4-203ENST00000394925 NFIBO00712 420 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 CYP2C9P11712 490 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 MYOGP15173 224 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 NOVP48745 357 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 MRPS5P82675 430 aaKnown RBP24.94■■□□□ 1.58
TRAF4-203ENST00000394925 SYDE2Q5VT97 1194 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 VWCEQ96DN2 955 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 TOMM22Q9NS69 142 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 TRMT13Q9NUP7 481 aaKnown RBP24.94■■□□□ 1.58
TRAF4-203ENST00000394925 POLR3EQ9NVU0 708 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 ANAPC4Q9UJX5 808 aa24.94■■□□□ 1.58
TRAF4-203ENST00000394925 FRMPD2Q68DX3 1309 aaPredicted RBP24.93■■□□□ 1.58
TRAF4-203ENST00000394925 PTPDC1A2A3K4 754 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 ORC4O43929 436 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 MYL3P08590 195 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 PPP2R2DQ66LE6 453 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 BTNL9Q6UXG8 535 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 ADAMTS19Q8TE59 1207 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 GPCPD1Q9NPB8 672 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 REV3LO60673 3130 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 BDP1A6H8Y1 2624 aa24.93■■□□□ 1.58
TRAF4-203ENST00000394925 SUPT20HL2P0C7V6 817 aa24.92■■□□□ 1.58
TRAF4-203ENST00000394925 OR6J1Q8NGC5 347 aa24.92■■□□□ 1.58
TRAF4-203ENST00000394925 PCDHA11Q9Y5I1 949 aa24.92■■□□□ 1.58
TRAF4-203ENST00000394925 TNKSO95271 1327 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 ATP2A2P16615 1042 aaKnown RBP24.91■■□□□ 1.58
TRAF4-203ENST00000394925 CPT1AP50416 773 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 PURAQ00577 322 aaKnown RBP24.91■■□□□ 1.58
TRAF4-203ENST00000394925 TTLL4Q14679 1199 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 RRP12Q5JTH9 1297 aaKnown RBP24.91■■□□□ 1.58
TRAF4-203ENST00000394925 DEFB128Q7Z7B8 93 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 MICALL1Q8N3F8 863 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 TMEM47Q9BQJ4 181 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 GPHNQ9NQX3 736 aaPredicted RBP24.91■■□□□ 1.58
TRAF4-203ENST00000394925 SCN5AQ14524 2016 aa24.91■■□□□ 1.58
TRAF4-203ENST00000394925 TRANK1O15050 2925 aa24.9■■□□□ 1.58
TRAF4-203ENST00000394925 TOP1P11387 765 aaKnown RBP24.9■■□□□ 1.58
TRAF4-203ENST00000394925 COL9A1P20849 921 aa24.9■■□□□ 1.58
TRAF4-203ENST00000394925 CALML3P27482 149 aa24.9■■□□□ 1.58
TRAF4-203ENST00000394925 SLC30A10Q6XR72 485 aa24.9■■□□□ 1.58
TRAF4-203ENST00000394925 IL27Q8NEV9 243 aa24.9■■□□□ 1.58
TRAF4-203ENST00000394925 MTG1Q9BT17 334 aaPredicted RBP24.9■■□□□ 1.58
TRAF4-203ENST00000394925 LOC102724159A0A0B4J2E5 919 aa24.89■■□□□ 1.58
TRAF4-203ENST00000394925 RBM47A0AV96 593 aaKnown RBP24.89■■□□□ 1.58
TRAF4-203ENST00000394925 FGRP09769 529 aa24.89■■□□□ 1.58
TRAF4-203ENST00000394925 PWP2Q15269 919 aaKnown RBP24.89■■□□□ 1.58
TRAF4-203ENST00000394925 ALX1Q15699 326 aa24.89■■□□□ 1.58
TRAF4-203ENST00000394925 FAM47CQ5HY64 1035 aa24.89■■□□□ 1.58
TRAF4-203ENST00000394925 PPP1R13LQ8WUF5 828 aa24.89■■□□□ 1.58
TRAF4-203ENST00000394925 CLEC4DQ8WXI8 215 aa24.89■■□□□ 1.58
TRAF4-203ENST00000394925 UHRF1Q96T88 793 aaPredicted RBP24.89■■□□□ 1.58
TRAF4-203ENST00000394925 SALL3Q9BXA9 1300 aa24.88■■□□□ 1.57
TRAF4-203ENST00000394925 PFKMP08237 780 aa24.88■■□□□ 1.57
TRAF4-203ENST00000394925 NBPF20Q3BBV1 942 aa24.88■■□□□ 1.57
TRAF4-203ENST00000394925 RNF207Q6ZRF8 634 aa24.88■■□□□ 1.57
TRAF4-203ENST00000394925 EVI5LQ96CN4 794 aa24.88■■□□□ 1.57
TRAF4-203ENST00000394925 TSPYL2Q9H2G4 693 aaPredicted RBP24.88■■□□□ 1.57
TRAF4-203ENST00000394925 HELLSQ9NRZ9 838 aa24.88■■□□□ 1.57
TRAF4-203ENST00000394925 TCF20Q9UGU0 1960 aaKnown RBP24.87■■□□□ 1.57
TRAF4-203ENST00000394925 SCN10AQ9Y5Y9 1956 aa24.87■■□□□ 1.57
TRAF4-203ENST00000394925 FGAP02671 866 aa24.87■■□□□ 1.57
TRAF4-203ENST00000394925 PDE4DQ08499 809 aa24.87■■□□□ 1.57
TRAF4-203ENST00000394925 BRDTQ58F21 947 aaPredicted RBP24.87■■□□□ 1.57
TRAF4-203ENST00000394925 TMEM67Q5HYA8 995 aa24.87■■□□□ 1.57
TRAF4-203ENST00000394925 ZBTB47Q9UFB7 747 aaPredicted RBP24.87■■□□□ 1.57
TRAF4-203ENST00000394925 PRRC2BQ5JSZ5 2229 aaKnown RBP24.86■■□□□ 1.57
TRAF4-203ENST00000394925 PPP2R5BQ15173 497 aa24.86■■□□□ 1.57
TRAF4-203ENST00000394925 ANKRD45Q5TZF3 282 aa24.86■■□□□ 1.57
TRAF4-203ENST00000394925 COPS5Q92905 334 aa24.86■■□□□ 1.57
TRAF4-203ENST00000394925 TCP11L1Q9NUJ3 509 aa24.86■■□□□ 1.57
TRAF4-203ENST00000394925 XIRP2A4UGR9 3374 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 RFXAPO00287 272 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 CA3P07451 260 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 PDHBP11177 359 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 ACTN1P12814 892 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 RPS6P62753 249 aaKnown RBP24.85■■□□□ 1.57
TRAF4-203ENST00000394925 FAM227BQ96M60 508 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 MPHOSPH6Q99547 160 aaKnown RBP24.85■■□□□ 1.57
TRAF4-203ENST00000394925 CERS4Q9HA82 394 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 RAD50Q92878 1312 aa24.85■■□□□ 1.57
TRAF4-203ENST00000394925 NKRFO15226 690 aaKnown RBP eCLIP24.84■■□□□ 1.572e-7■■□□□ 11.4
TRAF4-203ENST00000394925 HAND2P61296 217 aa24.84■■□□□ 1.57
TRAF4-203ENST00000394925 RETREG2Q8NC44 543 aa24.84■■□□□ 1.57
TRAF4-203ENST00000394925 SCFD2Q8WU76 684 aa24.84■■□□□ 1.57
TRAF4-203ENST00000394925 PNMA2Q9UL42 364 aa24.84■■□□□ 1.57
TRAF4-203ENST00000394925 A0A0D9SFI3 127 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 EDNRBP24530 442 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 RFC2P35250 354 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 TFF2Q03403 129 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 ZNF543Q08ER8 600 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms