RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CCDC96Q2M329 555 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 RCSD1Q6JBY9 416 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 EMBQ6PCB8 327 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 RUFY1Q96T51 708 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 TSG101Q99816 390 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 DUSP9Q99956 384 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 SELENOOQ9BVL4 669 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 IFIH1Q9BYX4 1025 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 TRIM9Q9C026 710 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 SUGCTQ9HAC7 445 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 PLAGL2Q9UPG8 496 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 PRPF6O94906 941 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 LCA5LO95447 670 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 SYF2O95926 243 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 ABL1P00519 1130 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 LDHCP07864 332 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 TSPY3P0CV98 308 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 TSPY8P0CW00 308 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 PSMD2Q13200 908 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 NNTQ13423 1086 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 TMEM266Q2M3C6 531 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 ALS2CLQ60I27 953 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 SV2BQ7L1I2 683 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 EFCAB13Q8IY85 973 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 C10orf67Q8IYJ2 551 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 RNF10Q8N5U6 811 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 CAPZA3Q96KX2 299 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 ZMYND12Q9H0C1 365 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 GOLGA6CA6NDK9 693 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 STXBP3O00186 592 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 COBLO75128 1261 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 GOLGA6DP0CG33 693 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 PLCG1P19174 1290 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 INF2Q27J81 1249 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 NEK8Q86SG6 692 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 SH2D4AQ9H788 454 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 GOLGA6AQ9NYA3 693 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 TRIM10Q9UDY6 481 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 SEC63Q9UGP8 760 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 MAD2L2Q9UI95 211 aa11.17□□□□□ -0.62
UBE2D3-208ENST00000394803 SHTN1A0MZ66 631 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 NMT2O60551 498 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 TOM1O60784 492 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 PHACTR2O75167 634 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 SEPT2Q15019 361 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 LRRC31Q6UY01 552 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 AENQ8WTP8 325 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 CDK5RAP3Q96JB5 506 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 TRERF1Q96PN7 1200 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 RIC8AQ9NPQ8 531 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 HDAC6Q9UBN7 1215 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 SSU72P8A0A1W2PR75 194 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 PJA2O43164 708 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 AKR1B10O60218 316 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 NAPAP54920 295 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 CORO7P57737 925 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 DDB1Q16531 1140 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 ANKRD40Q6AI12 368 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 CENPPQ6IPU0 288 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 PROM2Q8N271 834 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 GUF1Q8N442 669 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 RSPH14Q9UHP6 348 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 COL5A3P25940 1745 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 FLT1P17948 1338 aa11.16□□□□□ -0.62
UBE2D3-208ENST00000394803 PALM3A6NDB9 673 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 HSF2BPO75031 334 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 EPB41P11171 864 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 KIF11P52732 1056 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 TTC31Q49AM3 519 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 SYN2Q92777 582 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 NOX5Q96PH1 765 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 TMEM60Q9H2L4 133 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 NDST4Q9H3R1 872 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 LRWD1Q9UFC0 647 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms