RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 UBXN6Q9BZV1 441 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 STX8Q9UNK0 236 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 LAD1O00515 517 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 USP17L2Q6R6M4 530 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 LRRC31Q6UY01 552 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 CNGA4Q8IV77 575 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 ZNF444Q8N0Y2 327 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-204ENST00000394601 CEP95Q96GE4 821 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
PTBP1-204ENST00000394601 JPH2Q9BR39 696 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-204ENST00000394601 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 CCDC194A0A1B0GVG4 234 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 SF3A3Q12874 501 aaKnown RBP eCLIP17.36■□□□□ 0.377e-8■■■□□ 19.1
PTBP1-204ENST00000394601 PPFIBP1Q86W92 1011 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 ACRBPQ8NEB7 543 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 EYA3Q99504 573 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 ERLIN1O75477 346 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 TXNRD1Q16881 649 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTBP1-204ENST00000394601 PARP1P09874 1014 aaKnown RBP17.36■□□□□ 0.37
PTBP1-204ENST00000394601 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 CASP8Q14790 479 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 TTYH3Q9C0H2 523 aa17.36■□□□□ 0.37
PTBP1-204ENST00000394601 KLRG2A4D1S0 409 aaPredicted RBP17.35■□□□□ 0.37
PTBP1-204ENST00000394601 H7C1D1 291 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 ENC1O14682 589 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 N4BP3O15049 544 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 ERLIN2O94905 339 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 MYL1P05976 194 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 GABPAQ06546 454 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 CXorf56Q9H5V9 222 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 USP21Q9UK80 565 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 TOM1O60784 492 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 WDR59Q6PJI9 974 aa17.35■□□□□ 0.37
PTBP1-204ENST00000394601 ONECUT3O60422 494 aaPredicted RBP17.34■□□□□ 0.37
PTBP1-204ENST00000394601 UFL1O94874 794 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 PLCG1P19174 1290 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 FILIP1LQ4L180 1135 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 TBC1D16Q8TBP0 767 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 PLIN2Q99541 437 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 CHP1Q99653 195 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 RNF40O75150 1001 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 LDHCP07864 332 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 HOXA10P31260 410 aaPredicted RBP17.34■□□□□ 0.37
PTBP1-204ENST00000394601 SPAG1Q07617 926 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 MTMR9Q96QG7 549 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 DNAJC7Q99615 494 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 ZNF646O15015 1829 aaPredicted RBP17.34■□□□□ 0.37
PTBP1-204ENST00000394601 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
PTBP1-204ENST00000394601 USP17L5A8MUK1 530 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 SEMA3FQ13275 785 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 MB21D1Q8N884 522 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 TRIM9Q9C026 710 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 ARFGEF1Q9Y6D6 1849 aa17.34■□□□□ 0.37
PTBP1-204ENST00000394601 TTC26A0AVF1 554 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 LGALS16A8MUM7 142 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 KIF5CO60282 957 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 ATP2B4P23634 1241 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 TEX11Q8IYF3 940 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 KIRREL3Q8IZU9 778 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 PIGSQ96S52 555 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 MTMR7Q9Y216 660 aa17.33■□□□□ 0.37
PTBP1-204ENST00000394601 NRXN2Q9P2S2 1712 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 SMCO2A6NFE2 343 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 ADRA2BP18089 450 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTBP1-204ENST00000394601 DDR1Q08345 913 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 TMTC1Q8IUR5 882 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 AK8Q96MA6 479 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 THAP9Q9H5L6 903 aa17.33■□□□□ 0.36
PTBP1-204ENST00000394601 A0A1W2PQC6 194 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 PDHBP11177 359 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-204ENST00000394601 ATP2C2O75185 946 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 OR52Z1P0C646 297 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 STK4Q13043 487 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 MFSD14BQ5SR56 506 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 NOA1Q8NC60 698 aaKnown RBP17.32■□□□□ 0.36
PTBP1-204ENST00000394601 TFR2Q9UP52 801 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 CCNT1O60563 726 aaKnown RBP17.32■□□□□ 0.36
PTBP1-204ENST00000394601 EEF1GP26641 437 aaKnown RBP17.32■□□□□ 0.36
PTBP1-204ENST00000394601 AMPD2Q01433 879 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 COBLL1Q53SF7 1204 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 MIIPQ5JXC2 388 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-204ENST00000394601 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
PTBP1-204ENST00000394601 ANKZF1Q9H8Y5 726 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms