RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	GPCPD1	Q9NPB8	672 aa		10.41	□□□□□ -0.74
MITF-205	ENST00000394348	FANCL	Q9NW38	375 aa		10.41	□□□□□ -0.74
MITF-205	ENST00000394348	STK17A	Q9UEE5	414 aa		10.41	□□□□□ -0.74
MITF-205	ENST00000394348	ZNRF3	Q9ULT6	936 aa		10.41	□□□□□ -0.74
MITF-205	ENST00000394348	FER1L6	Q2WGJ9	1857 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	PPP1R3G	B7ZBB8	358 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	CCP110	O43303	1012 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	TUBB4A	P04350	444 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	RPN1	P04843	607 aa	Known RBP	10.4	□□□□□ -0.74
MITF-205	ENST00000394348	ATP1A3	P13637	1013 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	DPEP1	P16444	411 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	SFPQ	P23246	707 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
MITF-205	ENST00000394348	AFM	P43652	599 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	AMPD3	Q01432	767 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	TCP10	Q12799	353 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	DLGAP5	Q15398	846 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	COBLL1	Q53SF7	1204 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	NAALADL2	Q58DX5	795 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	CDKAL1	Q5VV42	579 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	ISM2	Q6H9L7	571 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	CNNM4	Q6P4Q7	775 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	TMC6	Q7Z403	805 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	CABP7	Q86V35	215 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	NIM1K	Q8IY84	436 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	OGFOD1	Q8N543	542 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	PRMT6	Q96LA8	375 aa	Predicted RBP	10.4	□□□□□ -0.74
MITF-205	ENST00000394348	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.4	□□□□□ -0.74
MITF-205	ENST00000394348	CSRNP1	Q96S65	589 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	TDRD3	Q9H7E2	651 aa	Known RBP	10.4	□□□□□ -0.74
MITF-205	ENST00000394348	RWDD2A	Q9UIY3	292 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	COL4A5	P29400	1685 aa		10.4	□□□□□ -0.74
MITF-205	ENST00000394348	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348		A0A1B0GTH6	734 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	KIF2A	O00139	706 aa	Predicted RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	PSMD14	O00487	310 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	PLA2G6	O60733	806 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	PPP1R11	O60927	126 aa	Predicted RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	RHOBTB3	O94955	611 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	FOS	P01100	380 aa	Predicted RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	SKIL	P12757	684 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	CYP3A7	P24462	503 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	USP11	P51784	963 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	CACNB3	P54284	484 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	EIF6	P56537	245 aa	Known RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	LRMP	Q12912	555 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	PAK1	Q13153	545 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	STIM1	Q13586	685 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	SEPT2	Q15019	361 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	KARS	Q15046	597 aa	Known RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	CALCRL	Q16602	461 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	QRICH1	Q2TAL8	776 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	JAKMIP3	Q5VZ66	844 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	FILIP1	Q7Z7B0	1213 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	FCHSD1	Q86WN1	690 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	CLEC10A	Q8IUN9	316 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	SIAH1	Q8IUQ4	282 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	FBXO41	Q8TF61	875 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	NOC3L	Q8WTT2	800 aa	Known RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	COA7	Q96BR5	231 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	CALML4	Q96GE6	196 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	ZBED3	Q96IU2	234 aa	Predicted RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	MBOAT7	Q96N66	472 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	MTR	Q99707	1265 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	C7orf25	Q9BPX7	421 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	LRRC27	Q9C0I9	530 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	SH2D4A	Q9H788	454 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	PSTPIP2	Q9H939	334 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	ARHGEF10L	Q9HCE6	1279 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	GINM1	Q9NU53	330 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	BIN2	Q9UBW5	565 aa	Predicted RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	ZNF70	Q9UC06	446 aa	Predicted RBP	10.39	□□□□□ -0.75
MITF-205	ENST00000394348	PCDHAC2	Q9Y5I4	1007 aa		10.39	□□□□□ -0.75
MITF-205	ENST00000394348	LTBP3	Q9NS15	1303 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	PSD	A5PKW4	1024 aa	Predicted RBP	10.38	□□□□□ -0.75
MITF-205	ENST00000394348	USP17L10	C9JJH3	530 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348		F5H6K3	240 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	NDUFB10	O96000	172 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	BMP3	P12645	472 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	CDK11B	P21127	795 aa	Known RBP	10.38	□□□□□ -0.75
MITF-205	ENST00000394348	RPS12	P25398	132 aa	Known RBP	10.38	□□□□□ -0.75
MITF-205	ENST00000394348	ATP2B2	Q01814	1243 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	MAP3K10	Q02779	954 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	KLRC3	Q07444	240 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	TBX2	Q13207	712 aa	Predicted RBP	10.38	□□□□□ -0.75
MITF-205	ENST00000394348	CDC37	Q16543	378 aa	Predicted RBP	10.38	□□□□□ -0.75
MITF-205	ENST00000394348	FILIP1L	Q4L180	1135 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	SYDE2	Q5VT97	1194 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	TTBK2	Q6IQ55	1244 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	FOXR2	Q6PJQ5	311 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	KCTD1	Q719H9	257 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	RASSF8	Q8NHQ8	419 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	MED15	Q96RN5	788 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	AMN	Q9BXJ7	453 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	PIM2	Q9P1W9	311 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	CNTNAP1	P78357	1384 aa		10.38	□□□□□ -0.75
MITF-205	ENST00000394348	ITIH6	Q6UXX5	1313 aa		10.37	□□□□□ -0.75
MITF-205	ENST00000394348	KDM3A	Q9Y4C1	1321 aa		10.37	□□□□□ -0.75
MITF-205	ENST00000394348	LRRC10B	A6NIK2	292 aa		10.37	□□□□□ -0.75
MITF-205	ENST00000394348	TBX3	O15119	743 aa		10.37	□□□□□ -0.75
MITF-205	ENST00000394348	KLRC4	O43908	158 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms