RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ANKS1AQ92625 1134 aa13□□□□□ -0.33
VTI1BP2-201ENST00000394154 SH2D4AQ9H788 454 aa13□□□□□ -0.33
VTI1BP2-201ENST00000394154 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
VTI1BP2-201ENST00000394154 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
VTI1BP2-201ENST00000394154 C5orf42Q9H799 3197 aa13□□□□□ -0.33
VTI1BP2-201ENST00000394154 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 M0R2C6 588 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 RABEP1Q15276 862 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 DEFB128Q7Z7B8 93 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 SPICE1Q8N0Z3 855 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 DDX11Q96FC9 970 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 UPF3BQ9BZI7 483 aaKnown RBP12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 PUS7LQ9H0K6 701 aaKnown RBP12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 FAM50BQ9Y247 325 aa12.99□□□□□ -0.33
VTI1BP2-201ENST00000394154 GRIN2DO15399 1336 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 VWA5AO00534 786 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 GPAA1O43292 621 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 RFC2P35250 354 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 BEX3Q00994 111 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 ZP2Q05996 745 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 BECN1Q14457 450 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 TMEM179Q6ZVK1 233 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 IPO9Q96P70 1041 aaKnown RBP12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 CTNNA3Q9UI47 895 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 SCN5AQ14524 2016 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 MCM3APO60318 1980 aa12.98□□□□□ -0.33
VTI1BP2-201ENST00000394154 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 ZEB2O60315 1214 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 HSPD1P10809 573 aaKnown RBP12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 GNAT2P19087 354 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 PLCD1P51178 756 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 GABPAQ06546 454 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 PKN1Q16512 942 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 SPRED2Q7Z698 418 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 KCNB2Q92953 911 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 KIF2CQ99661 725 aa12.97□□□□□ -0.33
VTI1BP2-201ENST00000394154 TRIOO75962 3097 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 MAGEB6P1A0A0J9YX57 407 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 MBD4O95243 580 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 FSCN1Q16658 493 aaKnown RBP12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 BMP8AQ7Z5Y6 402 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 MIGA1Q8NAN2 632 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 PPP1R9AQ9ULJ8 1098 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.33
VTI1BP2-201ENST00000394154 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 SIP14410 1827 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 SLC27A2O14975 620 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 APPP05067 770 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 TNFAIP2Q03169 654 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 ICA1Q05084 483 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 TCF15Q12870 199 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 KRT32Q14532 448 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 HERC4Q5GLZ8 1057 aaPredicted RBP12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 IER5LQ5T953 404 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 ARMCX2Q7L311 632 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 TLK2Q86UE8 772 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 ADHFE1Q8IWW8 467 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
VTI1BP2-201ENST00000394154 SPTBN4Q9H254 2564 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 ASTN1O14525 1302 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 MYH8P13535 1937 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 PTPRSQ13332 1948 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 CYP2C9P11712 490 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 PSMA5P28066 241 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 KCNJ6P48051 423 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 ERVK-21P61565 698 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 PSMC6P62333 389 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 ALX1Q15699 326 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 SIAH1Q8IUQ4 282 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 HSCBQ8IWL3 235 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 SNX21Q969T3 373 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms