RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 KRT25Q7Z3Z0 450 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 NEK8Q86SG6 692 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 KIAA0895Q8NCT3 520 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 PIGSQ96S52 555 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 EYA3Q99504 573 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 ZMYND12Q9H0C1 365 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 C6orf50Q9HD87 102 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 FAM207AQ9NSI2 230 aaPredicted RBP15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
GAPVD1-205ENST00000394084 CCDC88AQ3V6T2 1871 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 SPATA31A5Q5VU36 1347 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 SPATA31A7Q8IWB4 1347 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 C2orf54Q08AI8 447 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 FAM98CQ17RN3 349 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 CCDC96Q2M329 555 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 WDR66Q8TBY9 1149 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 MMTAG2Q9BU76 263 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 NUP58Q9BVL2 599 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 SEMA6BQ9H3T3 888 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 PSD3Q9NYI0 1048 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 ACTN2P35609 894 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 ATP2B2Q01814 1243 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 MUM1L1Q5H9M0 696 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 FKBP15Q5T1M5 1219 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 AMIGO3Q86WK7 504 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 FAM114A1Q8IWE2 563 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 CCDC42Q96M95 316 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 EIF3CLB5ME19 914 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 ZNF263O14978 683 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 EPHB6O15197 1021 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 CDK8P49336 464 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 MRPS25P82663 173 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 KIF5AQ12840 1032 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 LEKR1Q6ZMV7 388 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 EHBP1Q8NDI1 1231 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 GOLGA5Q8TBA6 731 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 RIN2Q8WYP3 895 aaPredicted RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 AK8Q96MA6 479 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 EIF3CQ99613 913 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 C7orf25Q9BPX7 421 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 CUEDC2Q9H467 287 aa15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 SEC63Q9UGP8 760 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-205ENST00000394084 C2CD5Q86YS7 1000 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 FAM71BQ8TC56 605 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 RRP36Q96EU6 259 aaKnown RBP15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 MLXIPQ9HAP2 919 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 IRS2Q9Y4H2 1338 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 TUBBP07437 444 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 BTDP43251 543 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 SPA17Q15506 151 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 SECISBP2LQ93073 1101 aaKnown RBP15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 PSMB7Q99436 277 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 ACBD3Q9H3P7 528 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 MMRN2Q9H8L6 949 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 FAM204AQ9H8W3 233 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 LCMT1Q9UIC8 334 aa15.54■□□□□ 0.08
GAPVD1-205ENST00000394084 FRMPD2Q68DX3 1309 aaPredicted RBP15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 TULP2O00295 520 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 MYBL2P10244 700 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 CKAP4Q07065 602 aaKnown RBP15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 CCDC170Q8IYT3 715 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 GNA11P29992 359 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 GSTO1P78417 241 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 AMPD3Q01432 767 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 CNNM4Q6P4Q7 775 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 FOXR1Q6PIV2 292 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 RETREG2Q8NC44 543 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 CEP95Q96GE4 821 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 SPZ1Q9BXG8 430 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 MAGEF1Q9HAY2 307 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 ROBO3Q96MS0 1386 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
GAPVD1-205ENST00000394084 MYMKA6NI61 221 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 USP17L5A8MUK1 530 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 RNF40O75150 1001 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 MATR3P43243 847 aaKnown RBP eCLIP15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 VAV2P52735 878 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 SV2BQ7L1I2 683 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 REXO1Q8N1G1 1221 aaKnown RBP15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 COA7Q96BR5 231 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 LZTS2Q9BRK4 669 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 CAPN6Q9Y6Q1 641 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 MOCS3O95396 460 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 GRB10Q13322 594 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 LRRC41Q15345 812 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 CDK5RAP3Q96JB5 506 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 UIMC1Q96RL1 719 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 ARHGAP20Q9P2F6 1191 aa15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 COL5A3P25940 1745 aaPredicted RBP15.52■□□□□ 0.08
GAPVD1-205ENST00000394084 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.07
GAPVD1-205ENST00000394084 POTEMA6NI47 508 aa15.52■□□□□ 0.07
GAPVD1-205ENST00000394084 EIF6P56537 245 aaKnown RBP15.52■□□□□ 0.07
GAPVD1-205ENST00000394084 ANKRD13CQ8N6S4 541 aa15.52■□□□□ 0.07
GAPVD1-205ENST00000394084 ERGIC2Q96RQ1 377 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms