RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 NLRP5P59047 1200 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 PTGISQ16647 500 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 CNOT6LQ96LI5 555 aaKnown RBP25.28■■□□□ 1.64
RARA-202ENST00000394081 ANKRD36CQ5JPF3 1778 aa25.27■■□□□ 1.64
RARA-202ENST00000394081 FGRP09769 529 aa25.27■■□□□ 1.64
RARA-202ENST00000394081 CFAP221Q4G0U5 840 aa25.27■■□□□ 1.64
RARA-202ENST00000394081 MIIPQ5JXC2 388 aa25.27■■□□□ 1.64
RARA-202ENST00000394081 TMED8Q6PL24 325 aaPredicted RBP25.27■■□□□ 1.64
RARA-202ENST00000394081 NR1D1P20393 614 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 KIF11P52732 1056 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 SLC7A5Q01650 507 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 ACTN3Q08043 901 aaPredicted RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 WHAMMQ8TF30 809 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 ZNF473Q8WTR7 871 aaKnown RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 NOC4LQ9BVI4 516 aaKnown RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 CEP83Q9Y592 693 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 TTC19Q6DKK2 380 aaPredicted RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 PPP4R3AQ6IN85 833 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 NFRKBQ6P4R8 1299 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 ARHGAP27Q6ZUM4 889 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 EIF1ADQ8N9N8 165 aaKnown RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 RNPC3Q96LT9 517 aaKnown RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 PCMTD1Q96MG8 357 aaPredicted RBP25.26■■□□□ 1.63
RARA-202ENST00000394081 ABCB11O95342 1321 aa25.26■■□□□ 1.63
RARA-202ENST00000394081 hCG_1642624A0A1W2PR95 340 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 ZNF233A6NK53 670 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 MOCS3O95396 460 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 FAM107AO95990 144 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 MTIF2P46199 727 aaKnown RBP25.25■■□□□ 1.63
RARA-202ENST00000394081 PFKFB3Q16875 520 aaPredicted RBP25.25■■□□□ 1.63
RARA-202ENST00000394081 RABEP2Q9H5N1 569 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 ARHGAP20Q9P2F6 1191 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 MYO1FO00160 1098 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 SYNE4Q8N205 404 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 ARFGAP2Q8N6H7 521 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 ACTR5Q9H9F9 607 aaPredicted RBP25.25■■□□□ 1.63
RARA-202ENST00000394081 MLXIPQ9HAP2 919 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 SH3GLB2Q9NR46 395 aa25.25■■□□□ 1.63
RARA-202ENST00000394081 GRID2IPA4D2P6 1211 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 TMCO5BA8MYB1 307 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 MDH1P40925 334 aaKnown RBP25.24■■□□□ 1.63
RARA-202ENST00000394081 DTHD1Q6ZMT9 781 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 KRT26Q7Z3Y9 468 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 SMCR8Q8TEV9 937 aaPredicted RBP25.24■■□□□ 1.63
RARA-202ENST00000394081 ATP6V1G3Q96LB4 118 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 CCDC43Q96MW1 224 aaKnown RBP25.24■■□□□ 1.63
RARA-202ENST00000394081 LAD1O00515 517 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 RDXP35241 583 aaKnown RBP25.24■■□□□ 1.63
RARA-202ENST00000394081 KLK7P49862 253 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 NEDD9Q14511 834 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 CCDC84Q86UT8 332 aaPredicted RBP25.24■■□□□ 1.63
RARA-202ENST00000394081 MYCBPAPQ8TBZ2 947 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 TLR10Q9BXR5 811 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 EDEM3Q9BZQ6 932 aa25.24■■□□□ 1.63
RARA-202ENST00000394081 RBM12Q9NTZ6 932 aaKnown RBP25.24■■□□□ 1.63
RARA-202ENST00000394081 MINDY4BA8MYZ0 360 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 RASSF9O75901 435 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 KRT14P02533 472 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 NLRP14Q86W24 1093 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 NOX5Q96PH1 765 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 CCT8L2Q96SF2 557 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 MATR3P43243 847 aaKnown RBP eCLIP25.23■■□□□ 1.63
RARA-202ENST00000394081 ATP1A2P50993 1020 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 C6orf89Q6UWU4 347 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 SRBD1Q8N5C6 995 aaKnown RBP25.23■■□□□ 1.63
RARA-202ENST00000394081 SH2D3CQ8N5H7 860 aa25.23■■□□□ 1.63
RARA-202ENST00000394081 UBA7P41226 1012 aa25.22■■□□□ 1.63
RARA-202ENST00000394081 PREPLQ4J6C6 727 aaPredicted RBP25.22■■□□□ 1.63
RARA-202ENST00000394081 TYW1BQ6NUM6 668 aa25.22■■□□□ 1.63
RARA-202ENST00000394081 LRIG3Q6UXM1 1119 aa25.22■■□□□ 1.63
RARA-202ENST00000394081 CCDC50Q8IVM0 306 aa25.22■■□□□ 1.63
RARA-202ENST00000394081 KLC4Q9NSK0 619 aa25.22■■□□□ 1.63
RARA-202ENST00000394081 SIK3Q9Y2K2 1263 aa25.22■■□□□ 1.63
RARA-202ENST00000394081 SSU72P8A0A1W2PR75 194 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 AKR1B10O60218 316 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 EIF4A3P38919 411 aaKnown RBP25.21■■□□□ 1.63
RARA-202ENST00000394081 PRPHP41219 470 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 CCDC40Q4G0X9 1142 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 ANKRD40Q6AI12 368 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 C2CD5Q86YS7 1000 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 JPH2Q9BR39 696 aaPredicted RBP25.21■■□□□ 1.63
RARA-202ENST00000394081 BRIP1Q9BX63 1249 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 BLIDQ8IZY5 108 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 PIK3R5Q8WYR1 880 aa25.21■■□□□ 1.63
RARA-202ENST00000394081 ZKSCAN4Q969J2 545 aaPredicted RBP25.21■■□□□ 1.63
RARA-202ENST00000394081 MYH10P35580 1976 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 PLEKP08567 350 aaPredicted RBP25.2■■□□□ 1.63
RARA-202ENST00000394081 HOXA7P31268 230 aaPredicted RBP25.2■■□□□ 1.63
RARA-202ENST00000394081 MAGEA1P43355 309 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 GUCY1A3Q02108 690 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 KCTD16Q68DU8 428 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 TAX1BP1Q86VP1 789 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 MIGA1Q8NAN2 632 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 RASSF8Q8NHQ8 419 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 MAGEC3Q8TD91 643 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 HINFPQ9BQA5 517 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 LRP2BPQ9P2M1 347 aa25.2■■□□□ 1.63
RARA-202ENST00000394081 ZNF330Q9Y3S2 320 aaPredicted RBP25.2■■□□□ 1.63
RARA-202ENST00000394081 GOLGA6L7A0A1B0GV03 622 aa25.2■■□□□ 1.62
RARA-202ENST00000394081 STARD3NLO95772 234 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms