RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 CALML3P27482 149 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 RPS6P62753 249 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 IRX6P78412 446 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 FPGSQ05932 587 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 GPATCH4Q5T3I0 446 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 TTC22Q5TAA0 569 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 RNF207Q6ZRF8 634 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 KIAA1211Q6ZU35 1233 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 FAM161BQ96MY7 647 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 ADD3Q9UEY8 706 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 Q9Y3F1 56 aa21.4■■□□□ 1.02
PDLIM7-205ENST00000393551 IMMTQ16891 758 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-205ENST00000393551 C16orf59Q7L2K0 433 aa21.39■■□□□ 1.01
PDLIM7-205ENST00000393551 IQCA1Q86XH1 822 aa21.39■■□□□ 1.01
PDLIM7-205ENST00000393551 TNKSO95271 1327 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 RBM47A0AV96 593 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 EDNRBP24530 442 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 NT5C2P49902 561 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 USH1GQ495M9 461 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 DUSP28Q4G0W2 176 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 SLC17A8Q8NDX2 589 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 TBC1D5Q92609 795 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 AP5M1Q9H0R1 490 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 CHD9Q3L8U1 2897 aa21.38■■□□□ 1.01
PDLIM7-205ENST00000393551 LOC102724159A0A0B4J2E5 919 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 SMAD3P84022 425 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 PWP2Q15269 919 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 CCDC178Q5BJE1 867 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 MFSD5Q6N075 450 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 ADGRF4Q8IZF3 695 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 RNPC3Q96LT9 517 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 WDR11Q9BZH6 1224 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 TTYH1Q9H313 450 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 KAT14Q9H8E8 782 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 CTNNA3Q9UI47 895 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 PNMA2Q9UL42 364 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 VCANP13611 3396 aa21.37■■□□□ 1.01
PDLIM7-205ENST00000393551 PSMC6P62333 389 aa21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 ITGA7Q13683 1181 aa21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 SEC23AQ15436 765 aa21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 CDC37Q16543 378 aaPredicted RBP21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 CYB5R4Q7L1T6 521 aa21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.36■■□□□ 1.016e-10■■■■□ 20
PDLIM7-205ENST00000393551 KRT23Q9C075 422 aa21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 SEMA6BQ9H3T3 888 aa21.36■■□□□ 1.01
PDLIM7-205ENST00000393551 CABYRO75952 493 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 PTH1RQ03431 593 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 ZNF697Q5TEC3 545 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 STAG2Q8N3U4 1231 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 RGS22Q8NE09 1264 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 DNERQ8NFT8 737 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 PPP1R12CQ9BZL4 782 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 JMJD4Q9H9V9 463 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 COL20A1Q9P218 1284 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 TAF6LQ9Y6J9 622 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 CUL9Q8IWT3 2517 aa21.35■■□□□ 1.01
PDLIM7-205ENST00000393551 UMODL1Q5DID0 1318 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 CSF2RAP15509 400 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 CHMLP26374 656 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 CYP2C18P33260 490 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 QRICH1Q2TAL8 776 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 ASPRV1Q53RT3 343 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 TRPV6Q9H1D0 765 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 CNNM2Q9H8M5 875 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 SCN10AQ9Y5Y9 1956 aa21.34■■□□□ 1.01
PDLIM7-205ENST00000393551 B4GALT4O60513 344 aa21.33■■□□□ 1.01
PDLIM7-205ENST00000393551 CYP21A2P08686 494 aa21.33■■□□□ 1.01
PDLIM7-205ENST00000393551 PARP1P09874 1014 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-205ENST00000393551 TMEM240Q5SV17 173 aa21.33■■□□□ 1.01
PDLIM7-205ENST00000393551 COPS5Q92905 334 aa21.33■■□□□ 1.01
PDLIM7-205ENST00000393551 CDX2Q99626 313 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-205ENST00000393551 BAZ2BQ9UIF8 2168 aaKnown RBP21.33■■□□□ 1
PDLIM7-205ENST00000393551 RAD50Q92878 1312 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 KIAA1217Q5T5P2 1943 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 TLR3O15455 904 aaKnown RBP21.32■■□□□ 1
PDLIM7-205ENST00000393551 ZEB2O60315 1214 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 ARIH2O95376 493 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 ACRP10323 421 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 PURAQ00577 322 aaKnown RBP21.32■■□□□ 1
PDLIM7-205ENST00000393551 PDE4DQ08499 809 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 SLC35G1Q2M3R5 365 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 RASIP1Q5U651 963 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 SYTL5Q8TDW5 730 aaPredicted RBP21.32■■□□□ 1
PDLIM7-205ENST00000393551 TAAR1Q96RJ0 339 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 UBAC1Q9BSL1 405 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 SENP2Q9HC62 589 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 VAT1LQ9HCJ6 419 aa21.32■■□□□ 1
PDLIM7-205ENST00000393551 ABCB11O95342 1321 aa21.31■■□□□ 1
PDLIM7-205ENST00000393551 CHD7Q9P2D1 2997 aa21.31■■□□□ 1
PDLIM7-205ENST00000393551 OPLAHO14841 1288 aa21.31■■□□□ 1
PDLIM7-205ENST00000393551 IFIT1BQ5T764 474 aaKnown RBP21.31■■□□□ 1
PDLIM7-205ENST00000393551 VWCEQ96DN2 955 aa21.31■■□□□ 1
PDLIM7-205ENST00000393551 MAD2L2Q9UI95 211 aa21.31■■□□□ 1
PDLIM7-205ENST00000393551 PPP1R11O60927 126 aaPredicted RBP21.3■■□□□ 1
PDLIM7-205ENST00000393551 PPIGQ13427 754 aaKnown RBP eCLIP21.3■■□□□ 17e-7■■■□□ 17.5
PDLIM7-205ENST00000393551 ZNF365Q70YC5 407 aa21.3■■□□□ 1
PDLIM7-205ENST00000393551 TMEM199Q8N511 208 aa21.3■■□□□ 1
PDLIM7-205ENST00000393551 OR6J1Q8NGC5 347 aa21.3■■□□□ 1
PDLIM7-205ENST00000393551 SCFD2Q8WU76 684 aa21.3■■□□□ 1
PDLIM7-205ENST00000393551 MTMR8Q96EF0 704 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms