RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KANK3Q6NY19 840 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 CCDC34Q96HJ3 373 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 CCPG1Q9ULG6 757 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 MRPL11Q9Y3B7 192 aaKnown RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 MYH7BA7E2Y1 1941 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 A0A087X0B3 334 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 FOXN1O15353 648 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 ACTN4O43707 911 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 SLC37A4O43826 429 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 FOSP01100 380 aaPredicted RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 NF2P35240 595 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 UBA7P41226 1012 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 TECP42680 631 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 ZNF165P49910 485 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 LDHDQ86WU2 507 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 GRAMD1CQ8IYS0 662 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 CPXCR1Q8N123 301 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.78□□□□□ -0.84
TDP1-203ENST00000393454 AGBL1Q96MI9 1066 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 NAP1L4Q99733 375 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 TMOD4Q9NZQ9 345 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 DDX25Q9UHL0 483 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 CSADQ9Y600 493 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 ABCB11O95342 1321 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 PP2D1A8MPX8 630 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 C19orf81C9J6K1 198 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 GCOM1H8Y6P7 765 aaPredicted RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 POLR2MP0CAP2 368 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 AFMP43652 599 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 IREB2P48200 963 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 POSTNQ15063 836 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 NOL9Q5SY16 702 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 PPP4R3AQ6IN85 833 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 C11orf57Q6ZUT1 292 aaPredicted RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 LUZP1Q86V48 1076 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 IQUBQ8NA54 791 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 PYM1Q9BRP8 204 aaKnown RBP9.78□□□□□ -0.84
TDP1-203ENST00000393454 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
TDP1-203ENST00000393454 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.84
TDP1-203ENST00000393454 IQCA1LA6NCM1 817 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 OPLAHO14841 1288 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 EDIL3O43854 480 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 ZBED4O75132 1171 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 CAVIN2O95810 425 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 ICAM1P05362 532 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 SLFN14P0C7P3 912 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 GCFC2P16383 781 aaKnown RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 USP11P51784 963 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 NLRP12P59046 1061 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 VGLL4Q14135 290 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 KARSQ15046 597 aaKnown RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 ELOA2Q8IYF1 753 aaPredicted RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 TBC1D5Q92609 795 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 CDCA5Q96FF9 252 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 PLIN2Q99541 437 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 TAF1DQ9H5J8 278 aaPredicted RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 RAVER2Q9HCJ3 691 aaKnown RBP9.77□□□□□ -0.85
TDP1-203ENST00000393454 CCDC39Q9UFE4 941 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 USP25Q9UHP3 1055 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 PPP1R9AQ9ULJ8 1098 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 PCDHA5Q9Y5H7 936 aa9.77□□□□□ -0.85
TDP1-203ENST00000393454 PIK3CDO00329 1044 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 ALAS1P13196 640 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 ZNF76P36508 570 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 STAT6P42226 847 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
TDP1-203ENST00000393454 CCDC173Q0VFZ6 552 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 RRAGBQ5VZM2 374 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 CABP7Q86V35 215 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 SMARCE1Q969G3 411 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 PAGE5Q96GU1 130 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 AK8Q96MA6 479 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 MTMR9Q96QG7 549 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 UIMC1Q96RL1 719 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 P2RX7Q99572 595 aaKnown RBP9.76□□□□□ -0.85
TDP1-203ENST00000393454 AFG3L2Q9Y4W6 797 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 PHIPQ8WWQ0 1821 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 BECN2A8MW95 431 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 GOLGA6L19H0YKK7 550 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 SMC2O95347 1197 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 DPCR1Q3MIW9 517 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 STAMQ92783 540 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 ATG4CQ96DT6 458 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 RAB34Q9BZG1 259 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 SLC38A10Q9HBR0 1119 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 HOMER2Q9NSB8 354 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 LRWD1Q9UFC0 647 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 TUBE1Q9UJT0 475 aa9.76□□□□□ -0.85
TDP1-203ENST00000393454 ZNF536O15090 1300 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms