RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FAM71BQ8TC56 605 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 MMTAG2Q9BU76 263 aaKnown RBP21.04■□□□□ 0.96
CBX1-202ENST00000393408 NOC4LQ9BVI4 516 aaKnown RBP21.04■□□□□ 0.96
CBX1-202ENST00000393408 SMCO2A6NFE2 343 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 CKAP4Q07065 602 aaKnown RBP21.04■□□□□ 0.96
CBX1-202ENST00000393408 NEK8Q86SG6 692 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 ZBTB9Q96C00 473 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 C6orf50Q9HD87 102 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 SAP30BPQ9UHR5 308 aaKnown RBP21.04■□□□□ 0.96
CBX1-202ENST00000393408 ANO9A1A5B4 782 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 IPO7O95373 1038 aaKnown RBP21.03■□□□□ 0.96
CBX1-202ENST00000393408 IRX5P78411 483 aaPredicted RBP21.03■□□□□ 0.96
CBX1-202ENST00000393408 KIAA0895Q8NCT3 520 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 ACBD3Q9H3P7 528 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 VIPAS39Q9H9C1 493 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 DDX60LQ5H9U9 1706 aaKnown RBP21.03■□□□□ 0.96
CBX1-202ENST00000393408 TARSL2A2RTX5 802 aaKnown RBP21.03■□□□□ 0.96
CBX1-202ENST00000393408 NKRFO15226 690 aaKnown RBP eCLIP21.03■□□□□ 0.961e-8■■□□□ 11.5
CBX1-202ENST00000393408 RPS6KA4O75676 772 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 MCM3P25205 808 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 GNA11P29992 359 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 TECP42680 631 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 AMPD3Q01432 767 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 SLC51AQ86UW1 340 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 CCDC102AQ96A19 550 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 CAPZA3Q96KX2 299 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 PCMTD1Q96MG8 357 aaPredicted RBP21.03■□□□□ 0.96
CBX1-202ENST00000393408 MED4Q9NPJ6 270 aa21.03■□□□□ 0.96
CBX1-202ENST00000393408 RNF216Q9NWF9 866 aaPredicted RBP21.03■□□□□ 0.96
CBX1-202ENST00000393408 ACTN2P35609 894 aa21.02■□□□□ 0.96
CBX1-202ENST00000393408 RAD51AP2Q09MP3 1159 aa21.02■□□□□ 0.96
CBX1-202ENST00000393408 HSP90B2PQ58FF3 399 aa21.02■□□□□ 0.96
CBX1-202ENST00000393408 RC3H1Q5TC82 1133 aaKnown RBP21.02■□□□□ 0.96
CBX1-202ENST00000393408 CNNM4Q6P4Q7 775 aa21.02■□□□□ 0.96
CBX1-202ENST00000393408 SEMA6BQ9H3T3 888 aa21.02■□□□□ 0.96
CBX1-202ENST00000393408 VAV2P52735 878 aa21.02■□□□□ 0.95
CBX1-202ENST00000393408 ANKIB1Q9P2G1 1089 aa21.02■□□□□ 0.95
CBX1-202ENST00000393408 LEMD3Q9Y2U8 911 aa21.02■□□□□ 0.95
CBX1-202ENST00000393408 DUSP10Q9Y6W6 482 aa21.02■□□□□ 0.95
CBX1-202ENST00000393408 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
CBX1-202ENST00000393408 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
CBX1-202ENST00000393408 ZPR1O75312 459 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 LDHCP07864 332 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 CYP27A1Q02318 531 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 FKBP15Q5T1M5 1219 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 CENPPQ6IPU0 288 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 HPS3Q969F9 1004 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 RRP36Q96EU6 259 aaKnown RBP21.01■□□□□ 0.95
CBX1-202ENST00000393408 EYA3Q99504 573 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 RTFDC1Q9BY42 306 aaPredicted RBP21.01■□□□□ 0.95
CBX1-202ENST00000393408 ZNF287Q9HBT7 754 aa21.01■□□□□ 0.95
CBX1-202ENST00000393408 ZNF263O14978 683 aa21■□□□□ 0.95
CBX1-202ENST00000393408 HNRNPH3P31942 346 aaKnown RBP21■□□□□ 0.95
CBX1-202ENST00000393408 CDK8P49336 464 aa21■□□□□ 0.95
CBX1-202ENST00000393408 AARSP49588 968 aaKnown RBP eCLIP21■□□□□ 0.95
CBX1-202ENST00000393408 ORC2Q13416 577 aaPredicted RBP21■□□□□ 0.95
CBX1-202ENST00000393408 USP17L2Q6R6M4 530 aa21■□□□□ 0.95
CBX1-202ENST00000393408 C16orf86Q6ZW13 317 aa21■□□□□ 0.95
CBX1-202ENST00000393408 NEDD1Q8NHV4 660 aa21■□□□□ 0.95
CBX1-202ENST00000393408 TBCKQ8TEA7 893 aa21■□□□□ 0.95
CBX1-202ENST00000393408 IQCDQ96DY2 449 aa21■□□□□ 0.95
CBX1-202ENST00000393408 MAP9Q49MG5 647 aa21■□□□□ 0.95
CBX1-202ENST00000393408 CALML4Q96GE6 196 aa21■□□□□ 0.95
CBX1-202ENST00000393408 PDE2AO00408 941 aaPredicted RBP20.99■□□□□ 0.95
CBX1-202ENST00000393408 SMARCA1P28370 1054 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 KIF5AQ12840 1032 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 SOGA3Q5TF21 947 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 TSGA10Q9BZW7 698 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 SLC39A2Q9NP94 309 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 MACROD2A1Z1Q3 448 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 ZNF185O15231 689 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 IDEP14735 1019 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 CAPN2P17655 700 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 GRB10Q13322 594 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 SECISBP2LQ93073 1101 aaKnown RBP20.99■□□□□ 0.95
CBX1-202ENST00000393408 BLOC1S4Q9NUP1 217 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 CWC15Q9P013 229 aaKnown RBP20.99■□□□□ 0.95
CBX1-202ENST00000393408 SEC63Q9UGP8 760 aaKnown RBP20.99■□□□□ 0.95
CBX1-202ENST00000393408 PLAGL2Q9UPG8 496 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 SIK3Q9Y2K2 1263 aa20.99■□□□□ 0.95
CBX1-202ENST00000393408 GNPATO15228 680 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 SV2BQ7L1I2 683 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 PTF1AQ7RTS3 328 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 CCDC42Q96M95 316 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 TRERF1Q96PN7 1200 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 PIGSQ96S52 555 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 BIN2Q9UBW5 565 aaPredicted RBP20.98■□□□□ 0.95
CBX1-202ENST00000393408 LRWD1Q9UFC0 647 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 HPCAL4Q9UM19 191 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 ESYT2A0FGR8 921 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 PHACTR2O75167 634 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 PLEKP08567 350 aaPredicted RBP20.98■□□□□ 0.95
CBX1-202ENST00000393408 BTDP43251 543 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 VWA3BQ502W6 1294 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 KRT26Q7Z3Y9 468 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 ZNF804AQ7Z570 1209 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 REXO1Q8N1G1 1221 aaKnown RBP20.98■□□□□ 0.95
CBX1-202ENST00000393408 CAGE1Q8TC20 777 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms