RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SHISA4Q96DD7 197 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 TEX13BQ9BXU2 312 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 MCOLN1Q9GZU1 580 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 UBA5Q9GZZ9 404 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 RANBP17Q9H2T7 1088 aaKnown RBP15.57■□□□□ 0.08
PTN-202ENST00000393083 CPVLQ9H3G5 476 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 RAVER2Q9HCJ3 691 aaKnown RBP15.57■□□□□ 0.08
PTN-202ENST00000393083 GABRQQ9UN88 632 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 HTTP42858 3142 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 ELP1O95163 1332 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 PRMT2P55345 433 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 PRKCZQ05513 592 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 PLEKHH3Q7Z736 793 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 CPXCR1Q8N123 301 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 LEO1Q8WVC0 666 aaPredicted RBP15.56■□□□□ 0.08
PTN-202ENST00000393083 COA7Q96BR5 231 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 USP28Q96RU2 1077 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 PHF20Q9BVI0 1012 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 RIPK3Q9Y572 518 aa15.56■□□□□ 0.08
PTN-202ENST00000393083 SLC25A27O95847 323 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 U2AF2P26368 475 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTN-202ENST00000393083 SMARCA1P28370 1054 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 FLT3LGP49771 235 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 UBE2HP62256 183 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 CEBPZQ03701 1054 aaKnown RBP15.55■□□□□ 0.08
PTN-202ENST00000393083 MORN1Q5T089 497 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
PTN-202ENST00000393083 FBXO46Q6PJ61 603 aaPredicted RBP15.55■□□□□ 0.08
PTN-202ENST00000393083 USP6NLQ92738 828 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 FTOQ9C0B1 505 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTN-202ENST00000393083 FOXP1Q9H334 677 aaPredicted RBP15.55■□□□□ 0.08
PTN-202ENST00000393083 MROH8Q9H579 483 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 DOCK3Q8IZD9 2030 aa15.55■□□□□ 0.08
PTN-202ENST00000393083 BTBD18B2RXH4 712 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 PTPREP23469 700 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 KRT2P35908 639 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 NCAPG2Q86XI2 1143 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 CCAR1Q8IX12 1150 aaKnown RBP15.54■□□□□ 0.08
PTN-202ENST00000393083 ADGRF4Q8IZF3 695 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
PTN-202ENST00000393083 RRP36Q96EU6 259 aaKnown RBP15.54■□□□□ 0.08
PTN-202ENST00000393083 AGBL1Q96MI9 1066 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 GZF1Q9H116 711 aaPredicted RBP15.54■□□□□ 0.08
PTN-202ENST00000393083 BRMS1Q9HCU9 246 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 SEC63Q9UGP8 760 aaKnown RBP15.54■□□□□ 0.08
PTN-202ENST00000393083 CTDP1Q9Y5B0 961 aaPredicted RBP15.54■□□□□ 0.08
PTN-202ENST00000393083 PTCH2Q9Y6C5 1203 aa15.54■□□□□ 0.08
PTN-202ENST00000393083 ICAM1P05362 532 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 COPB2P35606 906 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 GRB14Q14449 540 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 TPRNQ4KMQ1 711 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 CCDC174Q6PII3 467 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 NOSTRINQ8IVI9 506 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 MTMR8Q96EF0 704 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 JMJD4Q9H9V9 463 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 PLXNB2O15031 1838 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 SLC15A5A6NIM6 579 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 STRNO43815 780 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 NLRP5P59047 1200 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 NR5A1Q13285 461 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 IRF5Q13568 498 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 WDR78Q5VTH9 848 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 WWC2Q6AWC2 1192 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 CAVIN1Q6NZI2 390 aaKnown RBP15.53■□□□□ 0.08
PTN-202ENST00000393083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTN-202ENST00000393083 HEATR3Q7Z4Q2 680 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 CCDC148Q8NFR7 591 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 OXER1Q8TDS5 423 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 SOCS4Q8WXH5 440 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 NUDT12Q9BQG2 462 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 SH3GLB2Q9NR46 395 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 RTEL1Q9NZ71 1219 aa15.53■□□□□ 0.08
PTN-202ENST00000393083 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.07
PTN-202ENST00000393083 ABRAQ8N0Z2 381 aa15.52■□□□□ 0.07
PTN-202ENST00000393083 PIGSQ96S52 555 aa15.52■□□□□ 0.07
PTN-202ENST00000393083 POLR3EQ9NVU0 708 aa15.52■□□□□ 0.07
PTN-202ENST00000393083 RCOR1Q9UKL0 485 aa15.52■□□□□ 0.07
PTN-202ENST00000393083 CLIC4Q9Y696 253 aa15.52■□□□□ 0.07
PTN-202ENST00000393083 STXBP3O00186 592 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 YEATS4O95619 227 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 CALML3P27482 149 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 MAP2K5Q13163 448 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 STK38Q15208 465 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 NPY5RQ15761 445 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 CDC37Q16543 378 aaPredicted RBP15.51■□□□□ 0.07
PTN-202ENST00000393083 TKFCQ3LXA3 575 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 ANO1Q5XXA6 986 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 TNS4Q8IZW8 715 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 CHST13Q8NET6 341 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 RAET1EQ8TD07 263 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 BARHL2Q9NY43 387 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 CCPG1Q9ULG6 757 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 IVNS1ABPQ9Y6Y0 642 aa15.51■□□□□ 0.07
PTN-202ENST00000393083 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
PTN-202ENST00000393083 HOXC6P09630 235 aa15.5■□□□□ 0.07
PTN-202ENST00000393083 FCER1AP12319 257 aa15.5■□□□□ 0.07
PTN-202ENST00000393083 XRCC5P13010 732 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms