RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 IRAK2O43187 625 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 DIAPH2O60879 1101 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 H2AFYO75367 372 aaKnown RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 UPP2O95045 317 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 CRTAMO95727 393 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ASLP04424 464 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ITGAVP06756 1048 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ASGR2P07307 311 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 RXRAP19793 462 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 HPDP32754 393 aaPredicted RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 PTPN5P54829 565 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 CABP4P57796 275 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 PTRH1Q86Y79 214 aaKnown RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 CDHR1Q96JP9 859 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ABCC9O60706 1549 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 PPEF1O14829 653 aaPredicted RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 ZEB2O60315 1214 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 KLF1Q13351 362 aaPredicted RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 AP3B2Q13367 1082 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 GTF2H3Q13889 308 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 VARS2Q5ST30 1063 aaKnown RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 RIPOR1Q6ZS17 1223 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 CDC37L1Q7L3B6 337 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 RAB11FIP4Q86YS3 637 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 MAP4K3Q8IVH8 894 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 VTA1Q9NP79 307 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 DIAPH3Q9NSV4 1193 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 DDX3YO15523 660 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 FSBPO95073 299 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 PIK3CAP42336 1068 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 GRIA4P48058 902 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 GABREP78334 506 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 DMRTA1Q5VZB9 504 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 KDELC2Q7Z4H8 507 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 CPLX4Q7Z7G2 160 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 NECAB3Q96P71 396 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 IWS1Q96ST2 819 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ACO2Q99798 780 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 ALG1Q9BT22 464 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 EMILIN2Q9BXX0 1053 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ABCB6Q9NP58 842 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 KLHL11Q9NVR0 708 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 CFDP1Q9UEE9 299 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 CEP131Q9UPN4 1083 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 EFCAB14O75071 495 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ULK1O75385 1050 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 DNAJC8O75937 253 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 MYCLP12524 364 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 NFKB1P19838 968 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ARF3P61204 181 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 ARF1P84077 181 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 ASTLQ6HA08 431 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 ZCCHC8Q6NZY4 707 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 CRACR2BQ8N4Y2 399 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 PCSK9Q8NBP7 692 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 C3orf58Q8NDZ4 430 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 SLC7A14Q8TBB6 771 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 IPCEF1Q8WWN9 437 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 KCTD13Q8WZ19 329 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 KIAA1191Q96A73 305 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 GCC1Q96CN9 775 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 SLC6A18Q96N87 628 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 KCNJ15Q99712 375 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 DPH2Q9BQC3 489 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 MRPL4Q9BYD3 311 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 CNNM1Q9NRU3 951 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 FNIP2Q9P278 1114 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 POM121BA6NF01 834 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ENC1O14682 589 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ABLIM3O94929 683 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 SOD2P04179 222 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 GTF2A2P52657 109 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 TPD52P55327 224 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 CLEC16AQ2KHT3 1053 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 MZT2AQ6P582 158 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ZNF449Q6P9G9 518 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 HDXQ7Z353 690 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 LMNTD2Q8IXW0 634 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ZMAT2Q96NC0 199 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 SLC4A9Q96Q91 983 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 MUC3BQ9H195 1237 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 WBP1LQ9NX94 342 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 STAP2Q9UGK3 403 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 FBXO10Q9UK96 956 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 PRDM2Q13029 1718 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ANKRD34BA5PLL1 514 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 WDR64B1ANS9 1081 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 M0R3H8 397 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 TPP1O14773 563 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 TNFSF4P23510 183 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 WNT7BP56706 349 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 RPL6Q02878 288 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 SWSAP1Q6NVH7 229 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 POMZP3Q6PJE2 187 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 TOGARAM2Q6ZUX3 1019 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 TAGAPQ8N103 731 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ZNF713Q8N859 430 aaPredicted RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 CHTF18Q8WVB6 975 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 ZBTB10Q96DT7 871 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 JAKMIP1Q96N16 626 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms