RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
LCA5-202ENST00000392959 ATP1A3P13637 1013 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 LMNB1P20700 586 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 GCKP35557 465 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 IRX4P78413 519 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 ZBED6P86452 979 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 TRIM68Q6AZZ1 485 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 CEP120Q8N960 986 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 CCDC197Q8NCU1 140 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 STAG1Q8WVM7 1258 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
LCA5-202ENST00000392959 OSBP2Q969R2 916 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 PCDHA4Q9UN74 947 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 MRPL11Q9Y3B7 192 aaKnown RBP14.34□□□□□ -0.11
LCA5-202ENST00000392959 ATP10AO60312 1499 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 ABCC12Q96J65 1359 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 TESPA1A2RU30 521 aaPredicted RBP14.34□□□□□ -0.11
LCA5-202ENST00000392959 ADD2P35612 726 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 FBXO38Q6PIJ6 1188 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 PLA2G4DQ86XP0 818 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 GLG1Q92896 1179 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
LCA5-202ENST00000392959 H0YIN7 160 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 MYO1FO00160 1098 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 MYL1P05976 194 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 DLATP10515 647 aaKnown RBP14.34□□□□□ -0.11
LCA5-202ENST00000392959 BFSP1Q12934 665 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 MESDQ14696 234 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 ODR4Q5SWX8 454 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 JRKLQ9Y4A0 524 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 IVNS1ABPQ9Y6Y0 642 aa14.34□□□□□ -0.11
LCA5-202ENST00000392959 BTDP43251 543 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 NSFP46459 744 aaKnown RBP14.33□□□□□ -0.11
LCA5-202ENST00000392959 PPP2R5CQ13362 524 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 SNCBQ16143 134 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 GNPTABQ3T906 1256 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 EFCAB13Q8IY85 973 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 LRRC8CQ8TDW0 803 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 HOOK2Q96ED9 719 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 RABGAP1Q9Y3P9 1069 aa14.33□□□□□ -0.11
LCA5-202ENST00000392959 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.12
LCA5-202ENST00000392959 RFC1P35251 1148 aaPredicted RBP14.33□□□□□ -0.12
LCA5-202ENST00000392959 AFG3L2Q9Y4W6 797 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 PGRMC1O00264 195 aaKnown RBP14.33□□□□□ -0.12
LCA5-202ENST00000392959 SH2B2O14492 632 aaPredicted RBP14.33□□□□□ -0.12
LCA5-202ENST00000392959 NDUFA10O95299 355 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 SLFN13Q68D06 897 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 CFAP61Q8NHU2 1237 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 RWDD2AQ9UIY3 292 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 SRPRBQ9Y5M8 271 aaKnown RBP14.33□□□□□ -0.12
LCA5-202ENST00000392959 H0YCG3 227 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 ICA1Q05084 483 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 PABPC4Q13310 644 aaKnown RBP eCLIP14.33□□□□□ -0.12
LCA5-202ENST00000392959 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
LCA5-202ENST00000392959 PANX2Q96RD6 677 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 CARD10Q9BWT7 1032 aa14.33□□□□□ -0.12
LCA5-202ENST00000392959 A0A087WUV0 522 aaPredicted RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 CCNE1P24864 410 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 CDC25AP30304 524 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 POLR2BP30876 1174 aaKnown RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 PTPN12Q05209 780 aaKnown RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 SCYL2Q6P3W7 929 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 TEKT3Q9BXF9 490 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 GCC2Q8IWJ2 1684 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 ALAS1P13196 640 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 ATP2B4P23634 1241 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 KRT81Q14533 505 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 SUPT20HQ8NEM7 779 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 NSMCE1Q8WV22 266 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 SASH1O94885 1247 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 BAG2O95816 211 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 CXCR5P32302 372 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 LIFRP42702 1097 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 CASP8Q14790 479 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 LRRC41Q15345 812 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 SARM1Q6SZW1 724 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 HAUS1Q96CS2 278 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 PUS7LQ9H0K6 701 aaKnown RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 GPHNQ9NQX3 736 aaPredicted RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 RNF8O76064 485 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 LTKP29376 864 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 PTK2Q05397 1052 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 POLA2Q14181 598 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 KRT26Q7Z3Y9 468 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 KSR1Q8IVT5 923 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 GBP7Q8N8V2 638 aaPredicted RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 AIFM3Q96NN9 605 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 MYCBPQ99417 103 aaPredicted RBP14.32□□□□□ -0.12
LCA5-202ENST00000392959 ATG3Q9NT62 314 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 STK17AQ9UEE5 414 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 ATP8A1Q9Y2Q0 1164 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 USH1CQ9Y6N9 552 aa14.32□□□□□ -0.12
LCA5-202ENST00000392959 STAM2O75886 525 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms