RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
SCN3B-202ENST00000392770 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
SCN3B-202ENST00000392770 CDC25AP30304 524 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 LIG4P49917 911 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 BARGINQ6ZT62 677 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 TSNARE1Q96NA8 513 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
SCN3B-202ENST00000392770 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 ELF2Q15723 593 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 PSMB7Q99436 277 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 PPP2R2CQ9Y2T4 447 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 CSF1RP07333 972 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 DMP1Q13316 513 aaPredicted RBP18.3■□□□□ 0.52
SCN3B-202ENST00000392770 MYRIPQ8NFW9 859 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 UBLCP1Q8WVY7 318 aaPredicted RBP18.3■□□□□ 0.52
SCN3B-202ENST00000392770 CDC27P30260 824 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 CALCOCO2Q13137 446 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 UTYO14607 1347 aa18.3■□□□□ 0.52
SCN3B-202ENST00000392770 ERCC5P28715 1186 aaPredicted RBP18.29■□□□□ 0.52
SCN3B-202ENST00000392770 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 EPSTI1Q96J88 318 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 SELENOSQ9BQE4 189 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
SCN3B-202ENST00000392770 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
SCN3B-202ENST00000392770 PAGE5Q96GU1 130 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 MYO1AQ9UBC5 1043 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 IKBKBO14920 756 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 TMEM179Q6ZVK1 233 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 SLC44A5Q8NCS7 719 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
SCN3B-202ENST00000392770 GBP6Q6ZN66 633 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 SYCE1Q8N0S2 351 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 MEGF6O75095 1541 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 RESP18Q5W5W9 173 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 KIF2CQ99661 725 aa18.29■□□□□ 0.52
SCN3B-202ENST00000392770 PRPF6O94906 941 aaKnown RBP18.28■□□□□ 0.52
SCN3B-202ENST00000392770 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
SCN3B-202ENST00000392770 MAP3K9P80192 1104 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 PFKFB3Q16875 520 aaPredicted RBP18.28■□□□□ 0.52
SCN3B-202ENST00000392770 DCAF4Q8WV16 495 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 CALCOCO1Q9P1Z2 691 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 ITPK1Q13572 414 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
SCN3B-202ENST00000392770 MEIS1O00470 390 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 CEP104O60308 925 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 POLGP54098 1239 aaPredicted RBP18.28■□□□□ 0.52
SCN3B-202ENST00000392770 SUPT20HL1Q3ZLR7 823 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 STOX1Q6ZVD7 989 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 SP8Q8IXZ3 490 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 DHTKD1Q96HY7 919 aaPredicted RBP18.28■□□□□ 0.52
SCN3B-202ENST00000392770 LRRC41Q15345 812 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 P2RX5Q93086 422 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 SLC5A4Q9NY91 659 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 TSKSQ9UJT2 592 aa18.28■□□□□ 0.52
SCN3B-202ENST00000392770 GH2P01242 217 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 TTC16Q8NEE8 873 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 EEF2KMTQ96G04 330 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 HOXA13P31271 388 aaPredicted RBP18.27■□□□□ 0.52
SCN3B-202ENST00000392770 SLC8A3P57103 927 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 ARMCX5Q6P1M9 558 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 PPP1R14CQ8TAE6 165 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 PLCG1P19174 1290 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 CCND2P30279 289 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
SCN3B-202ENST00000392770 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 ODR4Q5SWX8 454 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 CERKQ8TCT0 537 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 IQCGQ9H095 443 aaKnown RBP18.27■□□□□ 0.52
SCN3B-202ENST00000392770 STK17AQ9UEE5 414 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 SEPT9Q9UHD8 586 aaPredicted RBP18.27■□□□□ 0.52
SCN3B-202ENST00000392770 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
SCN3B-202ENST00000392770 UTP11Q9Y3A2 253 aaKnown RBP18.27■□□□□ 0.52
SCN3B-202ENST00000392770 TSGA10IPQ3SY00 556 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 PODNQ7Z5L7 613 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 TDRD3Q9H7E2 651 aaKnown RBP18.27■□□□□ 0.51
SCN3B-202ENST00000392770 STAT1P42224 750 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 GOLGA8FQ08AF8 430 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 GOLGA8DPQ0D2H9 430 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 CFAP58Q5T655 872 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 ZBTB8OSQ8IWT0 167 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 TUBGCP2Q9BSJ2 902 aa18.27■□□□□ 0.51
SCN3B-202ENST00000392770 N4BP1O75113 896 aaKnown RBP18.26■□□□□ 0.51
SCN3B-202ENST00000392770 FAM160B1Q5W0V3 765 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 GJA10Q969M2 543 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 LARSQ9P2J5 1176 aaKnown RBP18.26■□□□□ 0.51
SCN3B-202ENST00000392770 COMMD10Q9Y6G5 202 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 DCCP43146 1447 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 CHGBP05060 677 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 RPS6KA1Q15418 735 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 PEX26Q7Z412 305 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 OXER1Q8TDS5 423 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 METTL14Q9HCE5 456 aaKnown RBP18.26■□□□□ 0.51
SCN3B-202ENST00000392770 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 NTSR2O95665 410 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 CASP14P31944 242 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms