RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 PDXDC1Q6P996 788 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 CCDC138Q96M89 665 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 MEIS3Q99687 375 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 BAG1Q99933 345 aaPredicted RBP4.34□□□□□ -1.71
UBR3-202ENST00000392632 ARMT1Q9H993 441 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 HOXC10Q9NYD6 342 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 LCMT1Q9UIC8 334 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 CDV3Q9UKY7 258 aaKnown RBP4.34□□□□□ -1.71
UBR3-202ENST00000392632 MAD1L1Q9Y6D9 718 aa4.34□□□□□ -1.71
UBR3-202ENST00000392632 BZW2Q9Y6E2 419 aaKnown RBP4.34□□□□□ -1.71
UBR3-202ENST00000392632 ASNSP08243 561 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 SRGAP2CP0DJJ0 459 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 CDC42EP1Q00587 391 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 TNFAIP2Q03169 654 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 EIF4A2Q14240 407 aaKnown RBP4.34□□□□□ -1.72
UBR3-202ENST00000392632 GCKRQ14397 625 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 ERFEQ4G0M1 354 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 DENND2CQ68D51 928 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 CATSPER4Q7RTX7 472 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 GPBP1Q86WP2 473 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 FOXP4Q8IVH2 680 aaPredicted RBP4.34□□□□□ -1.72
UBR3-202ENST00000392632 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 KBTBD3Q8NAB2 608 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 RAET1EQ8TD07 263 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 TMEM206Q9H813 350 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 GPBP1L1Q9HC44 474 aaPredicted RBP4.34□□□□□ -1.72
UBR3-202ENST00000392632 SPON1Q9HCB6 807 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 OLA1Q9NTK5 396 aaKnown RBP4.34□□□□□ -1.72
UBR3-202ENST00000392632 RSPH14Q9UHP6 348 aa4.34□□□□□ -1.72
UBR3-202ENST00000392632 MEIS1O00470 390 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PAMP19021 973 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ERCC3P19447 782 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SOX5P35711 763 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ST8SIA6P61647 398 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 NFX1Q12986 1120 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 ARHGAP44Q17R89 818 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 CCDC186Q7Z3E2 898 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 CEP57Q86XR8 500 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 MRPL47Q9HD33 250 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 TMEM232C9JQI7 657 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 GNGT2O14610 69 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 IKBKBO14920 756 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SART1O43290 800 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 LDHAP00338 332 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 H2AFZP0C0S5 128 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 STX2P32856 288 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 NAA25Q14CX7 972 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 HSP90AA5PQ58FG0 334 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 TNNI3KQ59H18 835 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 BTBD8Q5XKL5 378 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 RSBN1LQ6PCB5 846 aaPredicted RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 H2AFVQ71UI9 128 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 NEK8Q86SG6 692 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 NT5DC4Q86YG4 428 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 APOBEC3FQ8IUX4 373 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 PDZD8Q8NEN9 1154 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SH3TC2Q8TF17 1288 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 EVA1BQ9NVM1 165 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 THEGQ9P2T0 379 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SUFUQ9UMX1 484 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PARD3Q8TEW0 1356 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 NPATQ14207 1427 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ARHGAP42A6NI28 874 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 KBTBD13C9JR72 458 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 UBXN8O00124 270 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PPEF1O14829 653 aaPredicted RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 ZW10O43264 779 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PSAPP07602 524 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 HOXC9P31274 260 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ARHGAP25P42331 645 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PIK3CAP42336 1068 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ARHGDIAP52565 204 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 AMPD2Q01433 879 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 DPYDQ12882 1025 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 KIAA1755Q5JYT7 1200 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 RUFY3Q7L099 469 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 HAUS6Q7Z4H7 955 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 DNAAF3Q8N9W5 541 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 GTF3C2Q8WUA4 911 aaPredicted RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 NDEL1Q9GZM8 345 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 STN1Q9H668 368 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 SLC52A2Q9HAB3 445 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 MYO1AQ9UBC5 1043 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 DPP7Q9UHL4 492 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 AOX1Q06278 1338 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 SYNRGQ9UMZ2 1314 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 KRT87PA6NCN2 255 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 LAD1O00515 517 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 ESRRBO95718 433 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 INHBAP08476 426 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 CYP2J2P51589 502 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 CDC37Q16543 378 aaPredicted RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 MTHFSDQ2M296 383 aaKnown RBP4.33□□□□□ -1.72
UBR3-202ENST00000392632 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PGBD3Q8N328 593 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 PPM1KQ8N3J5 372 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 STX19Q8N4C7 294 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 MCUQ8NE86 351 aa4.33□□□□□ -1.72
UBR3-202ENST00000392632 FBXL13Q8NEE6 735 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms