RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 KCNJ18B7U540 433 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 GCNT3O95395 438 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 KCNJ12Q14500 433 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 SAMD7Q7Z3H4 446 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 CNGA4Q8IV77 575 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 ZFPM1Q8IX07 1006 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 DCPSQ96C86 337 aaKnown RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 MRPL44Q9H9J2 332 aaKnown RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 CGNQ9P2M7 1197 aaKnown RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 SPP2Q13103 211 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 HSP90B2PQ58FF3 399 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 SALL1Q9NSC2 1324 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 hCG_1984214I3L0E3 225 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 USO1O60763 962 aaKnown RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 VEGFAP15692 232 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 ZNF713Q8N859 430 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 ZNF579Q8NAF0 562 aaKnown RBP14.28□□□□□ -0.12
ERCC2-204ENST00000391945 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 CCDC42Q96M95 316 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 AK8Q96MA6 479 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 SERPINA10Q9UK55 444 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 GUCA1BQ9UMX6 200 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 FAM205AQ6ZU69 1335 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 C5P01031 1676 aa14.28□□□□□ -0.12
ERCC2-204ENST00000391945 CCDC169A6NNP5 214 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 TOB1P50616 345 aaPredicted RBP14.27□□□□□ -0.12
ERCC2-204ENST00000391945 ATP2C1P98194 919 aaPredicted RBP14.27□□□□□ -0.12
ERCC2-204ENST00000391945 MICALL2Q8IY33 904 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 NEK11Q8NG66 645 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 PDS5AQ29RF7 1337 aaKnown RBP14.27□□□□□ -0.12
ERCC2-204ENST00000391945 PKN1Q16512 942 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 SKIDA1Q1XH10 827 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 LRCH2Q5VUJ6 765 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 SLFN12Q8IYM2 578 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 WRNIP1Q96S55 665 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 FAM207AQ9NSI2 230 aaPredicted RBP14.27□□□□□ -0.12
ERCC2-204ENST00000391945 IMPACTQ9P2X3 320 aa14.27□□□□□ -0.12
ERCC2-204ENST00000391945 CETN1Q12798 172 aa14.27□□□□□ -0.13
ERCC2-204ENST00000391945 GADL1Q6ZQY3 521 aa14.27□□□□□ -0.13
ERCC2-204ENST00000391945 RDH13Q8NBN7 331 aa14.27□□□□□ -0.13
ERCC2-204ENST00000391945 ZDHHC15Q96MV8 337 aa14.27□□□□□ -0.13
ERCC2-204ENST00000391945 TCHPQ9BT92 498 aa14.27□□□□□ -0.13
ERCC2-204ENST00000391945 CNOT7Q9UIV1 285 aaKnown RBP14.27□□□□□ -0.13
ERCC2-204ENST00000391945 STXBP3O00186 592 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 IKBKBO14920 756 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 CETN3O15182 167 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 CYLC1P35663 651 aaPredicted RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 FAM26FQ5R3K3 315 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 ENGASEQ8NFI3 743 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 GJA10Q969M2 543 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 DESI2Q9BSY9 194 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 TMEM60Q9H2L4 133 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 PANK4Q9NVE7 773 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 FAM170AA1A519 330 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 GOLGA6L9A6NEM1 432 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 POLR3GO15318 223 aaPredicted RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 TNNT3P45378 269 aaPredicted RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 RHBDL3P58872 404 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 PTPAQ15257 358 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 CCDC144BQ3MJ40 725 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 ODF2Q5BJF6 829 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 EARS2Q5JPH6 523 aaKnown RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 MIER3Q7Z3K6 550 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 VPS36Q86VN1 386 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 HERC5Q9UII4 1024 aaKnown RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 KDM3AQ9Y4C1 1321 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 STRCQ7RTU9 1775 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 ERICH4A6NGS2 130 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 APOBEC3HQ6NTF7 200 aaKnown RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 ZHX2Q9Y6X8 837 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 KRT13P13646 458 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 GCFC2P16383 781 aaKnown RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 EIF2AK2P19525 551 aaKnown RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 ERCC5P28715 1186 aaPredicted RBP14.26□□□□□ -0.13
ERCC2-204ENST00000391945 TERF1P54274 439 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 PCDHB13Q9Y5F0 798 aa14.26□□□□□ -0.13
ERCC2-204ENST00000391945 PALM3A6NDB9 673 aaPredicted RBP14.25□□□□□ -0.13
ERCC2-204ENST00000391945 PPP1R2P41236 205 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 KMT5BQ4FZB7 885 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 GTPBP4Q9BZE4 634 aaKnown RBP14.25□□□□□ -0.13
ERCC2-204ENST00000391945 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 JMJD4Q9H9V9 463 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 RAPGEF1Q13905 1077 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 GRIPAP1Q4V328 841 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 NLRX1Q86UT6 975 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
ERCC2-204ENST00000391945 JADE2Q9NQC1 790 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms