RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 NDUFB10O96000 172 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 PTPN14Q15678 1187 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 FAM151AQ8WW52 585 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 C7orf25Q9BPX7 421 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 RAB34Q9BZG1 259 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 ZNF70Q9UC06 446 aaPredicted RBP21.49■■□□□ 1.03
ERCC2-203ENST00000391944 SYNPO2Q9UMS6 1093 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 MYH7BA7E2Y1 1941 aa21.48■■□□□ 1.03
ERCC2-203ENST00000391944 COL4A5P29400 1685 aa21.48■■□□□ 1.03
ERCC2-203ENST00000391944 LRRC10BA6NIK2 292 aa21.48■■□□□ 1.03
ERCC2-203ENST00000391944 GCFC2P16383 781 aaKnown RBP21.48■■□□□ 1.03
ERCC2-203ENST00000391944 GIMAP8Q8ND71 665 aaPredicted RBP21.48■■□□□ 1.03
ERCC2-203ENST00000391944 TRIM9Q9C026 710 aa21.48■■□□□ 1.03
ERCC2-203ENST00000391944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.48■■□□□ 1.037e-8■□□□□ 9.8
ERCC2-203ENST00000391944 AMPD3Q01432 767 aa21.47■■□□□ 1.03
ERCC2-203ENST00000391944 NAP1L4Q99733 375 aaKnown RBP21.47■■□□□ 1.03
ERCC2-203ENST00000391944 LIMA1Q9UHB6 759 aaKnown RBP21.47■■□□□ 1.03
ERCC2-203ENST00000391944 PAXBP1Q9Y5B6 917 aa21.47■■□□□ 1.03
ERCC2-203ENST00000391944 TEX33O43247 280 aa21.47■■□□□ 1.03
ERCC2-203ENST00000391944 FILIP1LQ4L180 1135 aa21.47■■□□□ 1.03
ERCC2-203ENST00000391944 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
ERCC2-203ENST00000391944 MAPK8IP1Q9UQF2 711 aa21.47■■□□□ 1.03
ERCC2-203ENST00000391944 CLRN2A0PK11 232 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 PBX1P40424 430 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 SPAG1Q07617 926 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 GRB10Q13322 594 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 CEP135Q66GS9 1140 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 ZNRF3Q9ULT6 936 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 ZBTB12Q9Y330 459 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L15C9J2P7 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L13C9JLJ4 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L11C9JVI0 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L18D6R9N7 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L22D6RA61 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L17D6RBQ6 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L19D6RCP7 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L20D6RJB6 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 H7C1D1 291 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 RIOK3O14730 519 aaKnown RBP21.46■■□□□ 1.03
ERCC2-203ENST00000391944 COBLO75128 1261 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 BMP3P12645 472 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 GOLGA8FQ08AF8 430 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 GOLGA8DPQ0D2H9 430 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L24Q0WX57 530 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 SPDYE2Q495Y8 402 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 USP17L6PQ6QN14 398 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 BTNL9Q6UXG8 535 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 TMEM139Q8IV31 216 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 TC2NQ8N9U0 490 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 NUP88Q99567 741 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-203ENST00000391944 AMNQ9BXJ7 453 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 STK17AQ9UEE5 414 aa21.46■■□□□ 1.03
ERCC2-203ENST00000391944 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.03
ERCC2-203ENST00000391944 A0A1W2PRG0 241 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 STIM1Q13586 685 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 FKBP1CQ5VVH2 108 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 CCDC47Q96A33 483 aaKnown RBP21.45■■□□□ 1.02
ERCC2-203ENST00000391944 GTPBP4Q9BZE4 634 aaKnown RBP21.45■■□□□ 1.02
ERCC2-203ENST00000391944 USP11P51784 963 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 SYDE2Q5VT97 1194 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 HAS1Q92839 578 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 PPP1R13BQ96KQ4 1090 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 PNMA5Q96PV4 448 aa21.45■■□□□ 1.02
ERCC2-203ENST00000391944 CNTNAP1P78357 1384 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 KIF2AO00139 706 aaPredicted RBP21.44■■□□□ 1.02
ERCC2-203ENST00000391944 KRT31Q15323 416 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 MCTP2Q6DN12 878 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 SV2BQ7L1I2 683 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 MTMR14Q8NCE2 650 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 AGBL3Q8NEM8 1001 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 BLOC1S4Q9NUP1 217 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 POTEMA6NI47 508 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 MEIS2O14770 477 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 TCP11X2Q5H9J9 407 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 FCHSD1Q86WN1 690 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 FBXO11Q86XK2 927 aa21.44■■□□□ 1.02
ERCC2-203ENST00000391944 PSMA7O14818 248 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 ARHGAP6O43182 974 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 CCP110O43303 1012 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 STX10O60499 249 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 ASIC1P78348 528 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 AP3B2Q13367 1082 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 KRT79Q5XKE5 535 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 NIM1KQ8IY84 436 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 ANKRD20A12PQ8NF67 263 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 DHTKD1Q96HY7 919 aaPredicted RBP21.43■■□□□ 1.02
ERCC2-203ENST00000391944 CDK5RAP3Q96JB5 506 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 BAG1Q99933 345 aaPredicted RBP21.43■■□□□ 1.02
ERCC2-203ENST00000391944 ADKP55263 362 aaKnown RBP21.43■■□□□ 1.02
ERCC2-203ENST00000391944 PDE4DQ08499 809 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 IKQ13123 557 aaPredicted RBP21.43■■□□□ 1.02
ERCC2-203ENST00000391944 ANO3Q9BYT9 981 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 ARHGEF10LQ9HCE6 1279 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 EXOC1Q9NV70 894 aa21.43■■□□□ 1.02
ERCC2-203ENST00000391944 CYP3A7-CYP3A51PA0A087WV96 503 aa21.42■■□□□ 1.02
ERCC2-203ENST00000391944 KCNJ18B7U540 433 aa21.42■■□□□ 1.02
ERCC2-203ENST00000391944 CYP3A7P24462 503 aa21.42■■□□□ 1.02
ERCC2-203ENST00000391944 KCNJ12Q14500 433 aa21.42■■□□□ 1.02
ERCC2-203ENST00000391944 IRF2BP1Q8IU81 584 aa21.42■■□□□ 1.02
ERCC2-203ENST00000391944 SNX29Q8TEQ0 813 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 312.4 ms