RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 PDHBP11177 359 aa21.05■□□□□ 0.96
RPUSD3-201ENST00000383820 PURBQ96QR8 312 aaKnown RBP21.05■□□□□ 0.96
RPUSD3-201ENST00000383820 GPCPD1Q9NPB8 672 aa21.05■□□□□ 0.96
RPUSD3-201ENST00000383820 UMODL1Q5DID0 1318 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 EYSQ5T1H1 3165 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 PTPDC1A2A3K4 754 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 SNHG28P0DPA3 235 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 PTGS1P23219 599 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 CPT1AP50416 773 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 TMEM63BQ5T3F8 832 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 RPUSD2Q8IZ73 545 aaKnown RBP21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 MPHOSPH6Q99547 160 aaKnown RBP21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 WDR11Q9BZH6 1224 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 TRPV6Q9H1D0 765 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 ALDH8A1Q9H2A2 487 aaPredicted RBP21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 CDH23Q9H251 3354 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 FRMPD2Q68DX3 1309 aaPredicted RBP21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 CCDC171Q6TFL3 1326 aa21.04■□□□□ 0.96
RPUSD3-201ENST00000383820 NKRFO15226 690 aaKnown RBP eCLIP21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 SUPT20HL2P0C7V6 817 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 NT5C2P49902 561 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 PSMC6P62333 389 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 AKNAD1Q5T1N1 836 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 MFSD6Q6ZSS7 791 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 CLEC4DQ8WXI8 215 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 CRBNQ96SW2 442 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 WNT8AQ9H1J5 351 aa21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 CXXC1Q9P0U4 656 aaPredicted RBP21.03■□□□□ 0.96
RPUSD3-201ENST00000383820 MFAP1P55081 439 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 CCL23P55773 120 aa21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 PURAQ00577 322 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 NMIQ13287 307 aaPredicted RBP21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 BRDTQ58F21 947 aaPredicted RBP21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 RNF207Q6ZRF8 634 aa21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 ZNF589Q86UQ0 364 aaPredicted RBP21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 USP38Q8NB14 1042 aa21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 DNERQ8NFT8 737 aa21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 MAF1Q9H063 256 aa21.02■□□□□ 0.96
RPUSD3-201ENST00000383820 B4DLN1 442 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 PFKMP08237 780 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 EDNRBP24530 442 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 CALML3P27482 149 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 MRPL12P52815 198 aaKnown RBP21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 RPS6P62753 249 aaKnown RBP21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 AAMPQ13685 434 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 TJAP1Q5JTD0 557 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 GPATCH4Q5T3I0 446 aaKnown RBP21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 SLC30A10Q6XR72 485 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 OTOP2Q7RTS6 562 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 PRDM12Q9H4Q4 367 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 RAD50Q92878 1312 aa21.01■□□□□ 0.95
RPUSD3-201ENST00000383820 PRUNE2Q8WUY3 3088 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 KPNA6O60684 536 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 HAND2P61296 217 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 PDE4DQ08499 809 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 RGS22Q8NE09 1264 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 OR6J1Q8NGC5 347 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 SCFD2Q8WU76 684 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 ESR2Q92731 530 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 MTG1Q9BT17 334 aaPredicted RBP21■□□□□ 0.95
RPUSD3-201ENST00000383820 SLC28A3Q9HAS3 691 aa21■□□□□ 0.95
RPUSD3-201ENST00000383820 GPHNQ9NQX3 736 aaPredicted RBP21■□□□□ 0.95
RPUSD3-201ENST00000383820 GBF1Q92538 1859 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 TRIM6-TRIM34B2RNG4 842 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 PPP2R5BQ15173 497 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 CCDC178Q5BJE1 867 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 DGKHQ86XP1 1220 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 NKX2-4Q9H2Z4 354 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 SLC4A7Q9Y6M7 1214 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 TNKSO95271 1327 aa20.99■□□□□ 0.95
RPUSD3-201ENST00000383820 SCN10AQ9Y5Y9 1956 aa20.98■□□□□ 0.95
RPUSD3-201ENST00000383820 A6NJR5 290 aa20.98■□□□□ 0.95
RPUSD3-201ENST00000383820 MYL3P08590 195 aa20.98■□□□□ 0.95
RPUSD3-201ENST00000383820 TBC1D10CQ8IV04 446 aa20.98■□□□□ 0.95
RPUSD3-201ENST00000383820 ATXN2LQ8WWM7 1075 aaKnown RBP20.98■□□□□ 0.95
RPUSD3-201ENST00000383820 TRMT13Q9NUP7 481 aaKnown RBP20.98■□□□□ 0.95
RPUSD3-201ENST00000383820 PTPN11Q06124 597 aaPredicted RBP20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 NFRKBQ6P4R8 1299 aa20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 RILPL2Q969X0 211 aa20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 VWCEQ96DN2 955 aa20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 SCLYQ96I15 445 aa20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 LNPKQ9C0E8 428 aa20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 YBX2Q9Y2T7 364 aaKnown RBP20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 PCDHA11Q9Y5I1 949 aa20.97■□□□□ 0.95
RPUSD3-201ENST00000383820 ZNF213O14771 459 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 CYP2C9P11712 490 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 SDSP20132 328 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 RFC2P35250 354 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 ADGRE1Q14246 886 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 IQCA1Q86XH1 822 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 OSBPL3Q9H4L5 887 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 MYO9BQ13459 2157 aa20.96■□□□□ 0.95
RPUSD3-201ENST00000383820 LAMA4Q16363 1823 aa20.95■□□□□ 0.94
RPUSD3-201ENST00000383820 PITPNM1O00562 1244 aa20.95■□□□□ 0.94
RPUSD3-201ENST00000383820 TXNP10599 105 aaKnown RBP20.95■□□□□ 0.94
RPUSD3-201ENST00000383820 TTLL4Q14679 1199 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms