RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SERPINB13Q9UIV8 391 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 MYO6Q9UM54 1294 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 PCDHB6Q9Y5E3 794 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 TARSL2A2RTX5 802 aaKnown RBP10.01□□□□□ -0.81
GPNMB-202ENST00000381990 N4BP1O75113 896 aaKnown RBP10.01□□□□□ -0.81
GPNMB-202ENST00000381990 BMP15O95972 392 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 RHOXF2BP0C7M4 288 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 NLRP5P59047 1200 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 AMPD2Q01433 879 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 AOC3Q16853 763 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 DEFB132Q7Z7B7 95 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 RHOXF2Q9BQY4 288 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 PDGFDQ9GZP0 370 aaPredicted RBP10.01□□□□□ -0.81
GPNMB-202ENST00000381990 FAM204AQ9H8W3 233 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 ABHD10Q9NUJ1 306 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 HLA-DOAP06340 250 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 SPECC1Q5M775 1068 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 ANKRD20A12PQ8NF67 263 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 AFAP1L1Q8TED9 768 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 FAM205CA6NFA0 338 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 KLRF2D3W0D1 207 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 CPP00450 1065 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 PARP1P09874 1014 aaKnown RBP10□□□□□ -0.81
GPNMB-202ENST00000381990 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
GPNMB-202ENST00000381990 LRRC31Q6UY01 552 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 SH3RF1Q7Z6J0 888 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 TTLL6Q8N841 843 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 SPZ1Q9BXG8 430 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 EHD4Q9H223 541 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
GPNMB-202ENST00000381990 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 PSMD14O00487 310 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 PPIP5K2O43314 1243 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 C21orf2O43822 256 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 RNF40O75150 1001 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 VEGFAP15692 232 aaPredicted RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 ATP2B1P20020 1258 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 SMARCA1P28370 1054 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 TRAPPC10P48553 1259 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 SLC35G1Q2M3R5 365 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 DNAJC21Q5F1R6 531 aaKnown RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 EARS2Q5JPH6 523 aaKnown RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 EHBP1Q8NDI1 1231 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 CPLX3Q8WVH0 158 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 FERMT2Q96AC1 680 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 SUGCTQ9HAC7 445 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 MTMR4Q9NYA4 1195 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 LIMA1Q9UHB6 759 aaKnown RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 LRRIQ3A6PVS8 624 aaPredicted RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 CYTH3O43739 400 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 NPM3O75607 178 aaKnown RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 ARHGAP25P42331 645 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 FXR1P51114 621 aaKnown RBP eCLIP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 GRIN1Q05586 938 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 NFIAQ12857 509 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 GALNT17Q6IS24 598 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 ZNF662Q6ZS27 426 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 TRAPPC11Q7Z392 1133 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 IDI2Q9BXS1 227 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 DHX36Q9H2U1 1008 aaKnown RBP9.99□□□□□ -0.81
GPNMB-202ENST00000381990 HAUS4Q9H6D7 363 aa9.99□□□□□ -0.81
GPNMB-202ENST00000381990 AKR1B1P15121 316 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 SHMT1P34896 483 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 GTF2A1P52655 376 aaPredicted RBP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 RBM5P52756 815 aaKnown RBP eCLIP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 USP14P54578 494 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 CKAP4Q07065 602 aaKnown RBP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 WWC2Q6AWC2 1192 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 GRAMD1CQ8IYS0 662 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 RTKN2Q8IZC4 609 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 BLIDQ8IZY5 108 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 GPKOWQ92917 476 aaPredicted RBP eCLIP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 PCDHA4Q9UN74 947 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 JRKLQ9Y4A0 524 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 PSME4Q14997 1843 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 GOLGA8HP0CJ92 632 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 DPYDQ12882 1025 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 TTC38Q5R3I4 469 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 NOA1Q8NC60 698 aaKnown RBP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 ACRBPQ8NEB7 543 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 COG1Q8WTW3 980 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 RUBCNQ92622 972 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 PAGE5Q96GU1 130 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 GEMIN8Q9NWZ8 242 aaKnown RBP9.98□□□□□ -0.81
GPNMB-202ENST00000381990 BARHL2Q9NY43 387 aa9.98□□□□□ -0.81
GPNMB-202ENST00000381990 PPP1R3GB7ZBB8 358 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 N4BP3O15049 544 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 SHOX2O60902 331 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 SYF2O95926 243 aaKnown RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 ERVK-24P63145 666 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms