RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
NUP58-202ENST00000381736 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
NUP58-202ENST00000381736 PCDHA5Q9Y5H7 936 aa12.6□□□□□ -0.39
NUP58-202ENST00000381736 SHANK3Q9BYB0 1731 aa12.6□□□□□ -0.39
NUP58-202ENST00000381736 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
NUP58-202ENST00000381736 STXBP3O00186 592 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
NUP58-202ENST00000381736 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 KCTD2Q14681 263 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
NUP58-202ENST00000381736 LRCH2Q5VUJ6 765 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 SNRNP48Q6IEG0 339 aaKnown RBP12.59□□□□□ -0.39
NUP58-202ENST00000381736 MIER3Q7Z3K6 550 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 LDHDQ86WU2 507 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
NUP58-202ENST00000381736 NFKBIEO00221 500 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 EPHX2P34913 555 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
NUP58-202ENST00000381736 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
NUP58-202ENST00000381736 ZHX1Q9UKY1 873 aaPredicted RBP12.59□□□□□ -0.39
NUP58-202ENST00000381736 BICDL2A1A5D9 508 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 NOP56O00567 594 aaKnown RBP12.58□□□□□ -0.39
NUP58-202ENST00000381736 LONRF3Q496Y0 759 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 PDCL2Q8N4E4 241 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 ZNF577Q9BSK1 485 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 DEF6Q9H4E7 631 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 FBXO28Q9NVF7 368 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 GPRC5DQ9NZD1 345 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 CTNND2Q9UQB3 1225 aa12.58□□□□□ -0.39
NUP58-202ENST00000381736 ARHGAP4P98171 946 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 MAEAQ7L5Y9 396 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
NUP58-202ENST00000381736 TIGD1Q96MW7 591 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 TEKT3Q9BXF9 490 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.58□□□□□ -0.4
NUP58-202ENST00000381736 GRAMD1CQ8IYS0 662 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
NUP58-202ENST00000381736 ANKS1AQ92625 1134 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 RNF146Q9NTX7 359 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 KIAA1024Q9UPX6 916 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 MRVI1Q9Y6F6 885 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 A0A087WWV3 80 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 SORBS3O60504 671 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 SLFN14P0C7P3 912 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
NUP58-202ENST00000381736 BICD1Q96G01 975 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 ABCB11O95342 1321 aa12.58□□□□□ -0.4
NUP58-202ENST00000381736 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 CCNA1P78396 465 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
NUP58-202ENST00000381736 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 ZMYND12Q9H0C1 365 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 TBC1D7Q9P0N9 293 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 FGRP09769 529 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 HS2ST1Q7LGA3 356 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 CACNA2D4Q7Z3S7 1137 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
NUP58-202ENST00000381736 C7orf43Q8WVR3 580 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 GOLPH3LQ9H4A5 285 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
NUP58-202ENST00000381736 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
NUP58-202ENST00000381736 TDP2O95551 362 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 COG2Q14746 738 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 GPBP1Q86WP2 473 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
NUP58-202ENST00000381736 RMDN3Q96TC7 470 aa12.57□□□□□ -0.4
NUP58-202ENST00000381736 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
NUP58-202ENST00000381736 PKN1Q16512 942 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 FDX1P10109 184 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 PAK1Q13153 545 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 ANKRD36CQ5JPF3 1778 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 GSDMDP57764 484 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
NUP58-202ENST00000381736 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
NUP58-202ENST00000381736 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
NUP58-202ENST00000381736 GINM1Q9NU53 330 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 ADD3Q9UEY8 706 aaKnown RBP12.56□□□□□ -0.4
NUP58-202ENST00000381736 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 SYNRGQ9UMZ2 1314 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 TRAF5O00463 557 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 STAT3P40763 770 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 PPP1R2P41236 205 aa12.56□□□□□ -0.4
NUP58-202ENST00000381736 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
NUP58-202ENST00000381736 GMCL1Q96IK5 515 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms