RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
SNRPB-201ENST00000381342 SLC30A10Q6XR72 485 aa18.71■□□□□ 0.59
SNRPB-201ENST00000381342 DDX11Q96FC9 970 aa18.71■□□□□ 0.59
SNRPB-201ENST00000381342 ZNF274Q96GC6 653 aaPredicted RBP18.71■□□□□ 0.59
SNRPB-201ENST00000381342 FLRT1Q9NZU1 646 aa18.71■□□□□ 0.59
SNRPB-201ENST00000381342 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
SNRPB-201ENST00000381342 PFASO15067 1338 aa18.71■□□□□ 0.59
SNRPB-201ENST00000381342 DNAJC25-GNG10A0A024R161 153 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 CCDC196A0A1B0GTZ2 297 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 EVI5O60447 810 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 CYP2C19P33261 490 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 UBE2Q1Q7Z7E8 422 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 CYP39A1Q9NYL5 469 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 OGDHLQ9ULD0 1010 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 PCDHA1Q9Y5I3 950 aa18.7■□□□□ 0.58
SNRPB-201ENST00000381342 PTPDC1A2A3K4 754 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 OPLAHO14841 1288 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 PPFIA3O75145 1194 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 CNTN2Q02246 1040 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 RABEP1Q15276 862 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 ZNF792Q3KQV3 632 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 MAML3Q96JK9 1138 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 FGD4Q96M96 766 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 C11orf49Q9H6J7 331 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 MRPL11Q9Y3B7 192 aaKnown RBP18.69■□□□□ 0.58
SNRPB-201ENST00000381342 FRMPD3Q5JV73 1810 aa18.69■□□□□ 0.58
SNRPB-201ENST00000381342 POTEB2H3BUK9 544 aa18.68■□□□□ 0.58
SNRPB-201ENST00000381342 BAATQ14032 418 aaPredicted RBP18.68■□□□□ 0.58
SNRPB-201ENST00000381342 GPKOWQ92917 476 aaPredicted RBP eCLIP18.68■□□□□ 0.58
SNRPB-201ENST00000381342 PHKBQ93100 1093 aa18.68■□□□□ 0.58
SNRPB-201ENST00000381342 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
SNRPB-201ENST00000381342 DIS3Q9Y2L1 958 aaKnown RBP18.68■□□□□ 0.58
SNRPB-201ENST00000381342 PFKFB2O60825 505 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 CALML3P27482 149 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 SCRN1Q12765 414 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 NTRK3Q16288 839 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 RNF207Q6ZRF8 634 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 HEATR3Q7Z4Q2 680 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 FAM133AQ8N9E0 248 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 TBC1D5Q92609 795 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 PURBQ96QR8 312 aaKnown RBP18.67■□□□□ 0.58
SNRPB-201ENST00000381342 SLKQ9H2G2 1235 aaPredicted RBP18.67■□□□□ 0.58
SNRPB-201ENST00000381342 V9GY48 417 aaPredicted RBP18.67■□□□□ 0.58
SNRPB-201ENST00000381342 ASTN1O14525 1302 aa18.67■□□□□ 0.58
SNRPB-201ENST00000381342 TNRC18O15417 2968 aaPredicted RBP18.66■□□□□ 0.58
SNRPB-201ENST00000381342 H0YGN5 161 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 IFNAR1P17181 557 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 RPS6P62753 249 aaKnown RBP18.66■□□□□ 0.58
SNRPB-201ENST00000381342 TRAF1Q13077 416 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 ME3Q16798 604 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 LHX8Q68G74 356 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 SLC26A6Q9BXS9 759 aa18.66■□□□□ 0.58
SNRPB-201ENST00000381342 SOWAHBA6NEL2 793 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 CPLX1O14810 134 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 DTNBO60941 627 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 CFBP00751 764 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 IGHA2P01877 340 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 MCF2L2Q86YR7 1114 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 ARRDC4Q8NCT1 418 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 DIS3LQ8TF46 1054 aaKnown RBP18.65■□□□□ 0.58
SNRPB-201ENST00000381342 TINF2Q9BSI4 451 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 NRBP1Q9UHY1 535 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
SNRPB-201ENST00000381342 DDX49Q9Y6V7 483 aaKnown RBP18.65■□□□□ 0.58
SNRPB-201ENST00000381342 SEPT4O43236 478 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 CYBAP13498 195 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 RGS22Q8NE09 1264 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 RNF26Q9BY78 433 aaPredicted RBP18.64■□□□□ 0.57
SNRPB-201ENST00000381342 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 LIMCH1Q9UPQ0 1083 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 BRCA2P51587 3418 aa18.64■□□□□ 0.57
SNRPB-201ENST00000381342 STXBP3O00186 592 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 PRPF3O43395 683 aaKnown RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 ST18O60284 1047 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 CD2BP2O95400 341 aaKnown RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 SCG2P13521 617 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 HOXA13P31271 388 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 HSD17B4P51659 736 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 ST3GAL1Q11201 340 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 PKN1Q16512 942 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 TYW1BQ6NUM6 668 aa18.63■□□□□ 0.57
SNRPB-201ENST00000381342 CPLX2Q6PUV4 134 aaKnown RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 ZNF467Q7Z7K2 595 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 MSL3Q8N5Y2 521 aaKnown RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 SYTL5Q8TDW5 730 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-201ENST00000381342 KBTBD13C9JR72 458 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 ALDH5A1P51649 535 aaPredicted RBP18.62■□□□□ 0.57
SNRPB-201ENST00000381342 NAPAP54920 295 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 AKAP17AQ02040 695 aaKnown RBP18.62■□□□□ 0.57
SNRPB-201ENST00000381342 GHRHRQ02643 423 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
SNRPB-201ENST00000381342 ARMCX2Q7L311 632 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms