RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 SLC37A4O43826 429 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 NEMFO60524 1076 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 ICAM1P05362 532 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 ALAS1P13196 640 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 CDC25AP30304 524 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 DEKP35659 375 aaKnown RBP9.09□□□□□ -0.95
ERCC8-202ENST00000381118 TREML2Q5T2D2 321 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 GADL1Q6ZQY3 521 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 ARMC9Q7Z3E5 817 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
ERCC8-202ENST00000381118 FERMT2Q96AC1 680 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 SDF4Q9BRK5 362 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 GLT8D2Q9H1C3 349 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 SLC38A10Q9HBR0 1119 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 FAM13BQ9NYF5 915 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 KCNH3Q9ULD8 1083 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 POLR2DO15514 142 aaKnown RBP9.08□□□□□ -0.96
ERCC8-202ENST00000381118 EDIL3O43854 480 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 LETM1O95202 739 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-202ENST00000381118 OPTNQ96CV9 577 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 C12orf42Q96LP6 360 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 MRPL11Q9Y3B7 192 aaKnown RBP9.08□□□□□ -0.96
ERCC8-202ENST00000381118 VWA5AO00534 786 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 NFIBO00712 420 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 ZBED4O75132 1171 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 UBXN2AP68543 259 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 PPATQ06203 517 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 TRAF1Q13077 416 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 AP3B2Q13367 1082 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 DTHD1Q6ZMT9 781 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 ERO1BQ86YB8 467 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
ERCC8-202ENST00000381118 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
ERCC8-202ENST00000381118 GJA10Q969M2 543 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 ABCB11O95342 1321 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 LOC285556D6RIA3 1793 aa9.08□□□□□ -0.96
ERCC8-202ENST00000381118 A0A087WWV3 80 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 FSD2A1L4K1 749 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 SPDYE5A6NIY4 337 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 PP2D1A8MPX8 630 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 POLR2MP0CAP2 368 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 TECP42680 631 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 TXKP42681 527 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 MKRN3Q13064 507 aaKnown RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 PLS1Q14651 629 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 COG2Q14746 738 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 ZRSR1Q15695 479 aaKnown RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 CALCRLQ16602 461 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 LONRF3Q496Y0 759 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 MUM1L1Q5H9M0 696 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 ARL6IP4Q66PJ3 421 aaKnown RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 CATSPERGQ6ZRH7 1159 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 CNNM3Q8NE01 707 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 TSPY26PQ9H489 355 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 DDX25Q9UHL0 483 aaKnown RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 PCNTO95613 3336 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 A0A087X0B3 334 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 PEX10O60683 326 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 DSG3P32926 999 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 SH3D19Q5HYK7 790 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 SNRNP48Q6IEG0 339 aaKnown RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 RASSF8Q8NHQ8 419 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 DHX58Q96C10 678 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-202ENST00000381118 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 GRPEL1Q9HAV7 217 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
ERCC8-202ENST00000381118 A0A0G2JLL6 359 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-202ENST00000381118 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-202ENST00000381118 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 LAD1O00515 517 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 FOXN1O15353 648 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 MARCH6O60337 910 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 CELF2O95319 508 aaKnown RBP9.06□□□□□ -0.96
ERCC8-202ENST00000381118 CCDC192P0DO97 292 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 TMEM132BQ14DG7 1078 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 SASS6Q6UVJ0 657 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 PRRT2Q7Z6L0 340 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-202ENST00000381118 TRERF1Q96PN7 1200 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 SERTAD1Q9UHV2 236 aa9.06□□□□□ -0.96
ERCC8-202ENST00000381118 MORC2Q9Y6X9 1032 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-202ENST00000381118 FAM237AA0A1B0GTK4 181 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 CTAGE5O15320 804 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 FOSP01100 380 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-202ENST00000381118 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-202ENST00000381118 ZNF76P36508 570 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 LONP1P36776 959 aaKnown RBP9.05□□□□□ -0.96
ERCC8-202ENST00000381118 TYRO3Q06418 890 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 PPIL2Q13356 520 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 PNOCQ13519 176 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 KARSQ15046 597 aaKnown RBP9.05□□□□□ -0.96
ERCC8-202ENST00000381118 PRR16Q569H4 304 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 PPP4R3AQ6IN85 833 aa9.05□□□□□ -0.96
ERCC8-202ENST00000381118 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms