RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.08
CDKL5-201ENST00000379989 TBC1D7Q9P0N9 293 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 BZW2Q9Y6E2 419 aaKnown RBP8.27□□□□□ -1.08
CDKL5-201ENST00000379989 MYH7P12883 1935 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 DUOX1Q9NRD9 1551 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 E2F6O75461 281 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 GHRP10912 638 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 DESP17661 470 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 POLE2P56282 527 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 BTG3Q14201 252 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 PNMA8AQ86V59 439 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 ZNF34Q8IZ26 560 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 ARHGEF10LQ9HCE6 1279 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 PPANQ9NQ55 473 aaKnown RBP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 ATXN10Q9UBB4 475 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 PCDHA7Q9UN72 937 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 H3BQV1 296 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 EVI5O60447 810 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 PRPF4BQ13523 1007 aaKnown RBP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 HSP90AA4PQ58FG1 418 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 IFFO2Q5TF58 517 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 MAEAQ7L5Y9 396 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 APLFQ8IW19 511 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 NAF1Q96HR8 494 aaKnown RBP8.27□□□□□ -1.09
CDKL5-201ENST00000379989 FAM81BQ96LP2 452 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 ZIM3Q96PE6 472 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 RUFY1Q96T51 708 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 KCNMB3Q9NPA1 279 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
CDKL5-201ENST00000379989 F8VZ95 297 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 VIMP08670 466 aaKnown RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 FUT4P22083 530 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 MAATS1Q7Z4T9 603 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 LCA5Q86VQ0 697 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 SPICE1Q8N0Z3 855 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 SMYD1Q8NB12 490 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 OPTNQ96CV9 577 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 PANX2Q96RD6 677 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 CORO1BQ9BR76 489 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 PDS5AQ29RF7 1337 aaKnown RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 HSF2BPO75031 334 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 STAT6P42226 847 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 PSMC4P43686 418 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 BPIFB4P59827 614 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 SLC7A5Q01650 507 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 ZNF268Q14587 947 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 NLRP10Q86W26 655 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 ERICH1Q86X53 443 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC63Q8NA47 563 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 P3H4Q92791 437 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 TUBGCP4Q9UGJ1 667 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 ABLIM1O14639 778 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 SRGAP2O75044 1071 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 PENKP01210 267 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 VIL1P09327 827 aaKnown RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 KIF5BP33176 963 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 CCNG1P51959 295 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 TFCP2Q12800 502 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 CUL4BQ13620 913 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 TOB2Q14106 344 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 LBRQ14739 615 aaKnown RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 TAF11Q15544 211 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 SGSM1Q2NKQ1 1148 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 RNF220Q5VTB9 566 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 FNBP4Q8N3X1 1017 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 DHRS1Q96LJ7 313 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 NDNQ99608 321 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 DBNLQ9UJU6 430 aaKnown RBP8.26□□□□□ -1.09
CDKL5-201ENST00000379989 WDR37Q9Y2I8 494 aa8.26□□□□□ -1.09
CDKL5-201ENST00000379989 COL24A1Q17RW2 1714 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 CTSWP56202 376 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 TSNAXIP1Q2TAA8 658 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 EPHA10Q5JZY3 1008 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 SIL1Q9H173 461 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 TTF2Q9UNY4 1162 aaKnown RBP8.25□□□□□ -1.09
CDKL5-201ENST00000379989 GMNCA6NCL1 334 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 C5orf60A6NFR6 353 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 AKR1B15C9JRZ8 316 aaPredicted RBP8.25□□□□□ -1.09
CDKL5-201ENST00000379989 SMAPO00193 183 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 ENC1O14682 589 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 GFPT2O94808 682 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 CCND1P24385 295 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 MRPS35P82673 323 aaKnown RBP8.25□□□□□ -1.09
CDKL5-201ENST00000379989 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 TRIM68Q6AZZ1 485 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 ADALQ6DHV7 355 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 TBC1D1Q86TI0 1168 aaPredicted RBP8.25□□□□□ -1.09
CDKL5-201ENST00000379989 DNAJC10Q8IXB1 793 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC155Q8N6L0 562 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 KIFAP3Q92845 792 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 CAPZA3Q96KX2 299 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 NACA2Q9H009 215 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms