RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 LDHCP07864 332 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 SSR1P43307 286 aaKnown RBP12.6□□□□□ -0.39
SMAD9-202ENST00000379826 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
SMAD9-202ENST00000379826 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 THAP9Q9H5L6 903 aa12.6□□□□□ -0.39
SMAD9-202ENST00000379826 USP17L3A6NCW0 530 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 USP17L4A6NCW7 530 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 USP17L1Q7RTZ2 530 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 ANKZF1Q9H8Y5 726 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 PRKAG2Q9UGJ0 569 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-202ENST00000379826 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 PAK2Q13177 524 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 KRT25Q7Z3Z0 450 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 SRLQ86TD4 932 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 INTS13Q9NVM9 706 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 SMARCAL1Q9NZC9 954 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMAD9-202ENST00000379826 KCNK3O14649 394 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 TBCAO75347 108 aaKnown RBP12.59□□□□□ -0.39
SMAD9-202ENST00000379826 EPB41L5Q9HCM4 733 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 SEMA3EO15041 775 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 USP14P54578 494 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 EHHADHQ08426 723 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 E2F4Q16254 413 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 NFRKBQ6P4R8 1299 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
SMAD9-202ENST00000379826 CTNNBL1Q8WYA6 563 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-202ENST00000379826 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
SMAD9-202ENST00000379826 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-202ENST00000379826 MYZAPP0CAP1 466 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 PHF20Q9BVI0 1012 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 LGALS16A8MUM7 142 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 ERFEQ4G0M1 354 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 KCND1Q9NSA2 647 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 KLRF2D3W0D1 207 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
SMAD9-202ENST00000379826 KCNQ4P56696 695 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-202ENST00000379826 BMP6P22004 513 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 ADCY7P51828 1080 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 KIF11P52732 1056 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 NBPF3Q9H094 633 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
SMAD9-202ENST00000379826 MECOMQ03112 1051 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 ADAT2Q7Z6V5 191 aaKnown RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 ALX1Q15699 326 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 GBP6Q6ZN66 633 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 A0A087X0B3 334 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 LRRIQ3A6PVS8 624 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 HEXIM1O94992 359 aaKnown RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 FCER1AP12319 257 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 NNTQ13423 1086 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 NTRK3Q16288 839 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 BEND6Q5SZJ8 279 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC91Q7Z6B0 441 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 NEK8Q86SG6 692 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 REXO1Q8N1G1 1221 aaKnown RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 ANKRD2Q9GZV1 360 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 ZRANB2O95218 330 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 TBX2Q13207 712 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 HERC4Q5GLZ8 1057 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC65Q8IXS2 484 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 EFCAB13Q8IY85 973 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 DHTKD1Q96HY7 919 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 LIMA1Q9UHB6 759 aaKnown RBP12.57□□□□□ -0.4
SMAD9-202ENST00000379826 NFU1Q9UMS0 254 aa12.57□□□□□ -0.4
SMAD9-202ENST00000379826 ALDH1B1P30837 517 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 PPP1R2P41236 205 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 ZBED6P86452 979 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 ATP2C1P98194 919 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 RPS6KA1Q15418 735 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 CARD10Q9BWT7 1032 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 ESYT3A0FGR9 886 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 CTNNA1P35221 906 aaKnown RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 UBR1Q8IWV7 1749 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 CSF1RP07333 972 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 MAGEA9P43362 315 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms