RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 MEIS3Q99687 375 aa17.36■□□□□ 0.37
KCNC1-202ENST00000379472 N4BP1O75113 896 aaKnown RBP17.36■□□□□ 0.37
KCNC1-202ENST00000379472 DRP2Q13474 957 aa17.36■□□□□ 0.37
KCNC1-202ENST00000379472 REXO1Q8N1G1 1221 aaKnown RBP17.36■□□□□ 0.37
KCNC1-202ENST00000379472 CHCHD3Q9NX63 227 aaKnown RBP17.36■□□□□ 0.37
KCNC1-202ENST00000379472 OCRLQ01968 901 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 GOLGA8FQ08AF8 430 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 GOLGA8DPQ0D2H9 430 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 IMPG1Q17R60 797 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 SPOPLQ6IQ16 392 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 GTF2IP78347 998 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 MECOMQ03112 1051 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 TRIM60Q495X7 471 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 PGBD3Q8N328 593 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 CAPN11Q9UMQ6 739 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 PSDA5PKW4 1024 aaPredicted RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 CAPZA2P47755 286 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 TUBB2AQ13885 445 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 TUBB2BQ9BVA1 445 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 TEKT3Q9BXF9 490 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 SELENONQ9NZV5 590 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 KIF17Q9P2E2 1029 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 IGSF3O75054 1194 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 KPNA2P52292 529 aaKnown RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 SH3BGRP55822 239 aaPredicted RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 RGL1Q9NZL6 768 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 RIPOR2Q9Y4F9 1068 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 H0YC42 278 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 CTDSPL2Q05D32 466 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 RWDD4Q6NW29 188 aaKnown RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 HOMER3Q9NSC5 361 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 INO80B-WBP1J3KQ70 363 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 PRPF4O43172 522 aaKnown RBP eCLIP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 TAF5LO75529 589 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 HADHAP40939 763 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 TEX9Q8N6V9 391 aa17.35■□□□□ 0.37
KCNC1-202ENST00000379472 INO80BQ9C086 356 aaPredicted RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 FARP1Q9Y4F1 1045 aaPredicted RBP17.35■□□□□ 0.37
KCNC1-202ENST00000379472 UHMK1Q8TAS1 419 aaKnown RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 RASEFQ8IZ41 740 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 CACTINQ8WUQ7 758 aaKnown RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 HPCAL4Q9UM19 191 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 POLA2Q14181 598 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 ACCSLQ4AC99 568 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 TJAP1Q5JTD0 557 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 BLZF1Q9H2G9 400 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 TTI1O43156 1089 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 PLCH2O75038 1416 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 AK2P54819 239 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 B4GALNT2Q8NHY0 566 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 PANK4Q9NVE7 773 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 STX18Q9P2W9 335 aaKnown RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 FMNL1O95466 1100 aaPredicted RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 HSP90AA5PQ58FG0 334 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 TMEM87BQ96K49 555 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 E9PMD0 336 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 TRIM4Q9C037 500 aa17.34■□□□□ 0.37
KCNC1-202ENST00000379472 WBP4O75554 376 aaKnown RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 BRD2P25440 801 aaKnown RBP17.34■□□□□ 0.37
KCNC1-202ENST00000379472 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.37
KCNC1-202ENST00000379472 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.37
KCNC1-202ENST00000379472 ARHGEF18Q6ZSZ5 1173 aa17.33■□□□□ 0.37
KCNC1-202ENST00000379472 PHF21AQ96BD5 680 aa17.33■□□□□ 0.37
KCNC1-202ENST00000379472 ZBTB18Q99592 522 aa17.33■□□□□ 0.37
KCNC1-202ENST00000379472 DYRK4Q9NR20 520 aa17.33■□□□□ 0.37
KCNC1-202ENST00000379472 TCF3P15923 654 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 DCAF4L1Q3SXM0 396 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 SYCE1LA8MT33 242 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 ARL4AP40617 200 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 PDE1AP54750 535 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 BBOF1Q8ND07 529 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 DEPDC1BQ8WUY9 529 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 OPTNQ96CV9 577 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 hCG_1642624A0A1W2PR95 340 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 HSPA6P17066 643 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 U2AF2P26368 475 aaKnown RBP eCLIP17.33■□□□□ 0.36
KCNC1-202ENST00000379472 SIX6OS1Q8N1H7 587 aa17.33■□□□□ 0.36
KCNC1-202ENST00000379472 GRIN1Q05586 938 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 SLFN12Q8IYM2 578 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 TXLNGQ9NUQ3 528 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 ARIH2O95376 493 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 DSTYKQ6XUX3 929 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 E2F6O75461 281 aa17.32■□□□□ 0.36
KCNC1-202ENST00000379472 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
KCNC1-202ENST00000379472 GCKP35557 465 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms