RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SCAND2PQ9GZW5 306 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-202ENST00000379446 ZNHIT6Q9NWK9 470 aaKnown RBP7.29□□□□□ -1.24
NEDD9-202ENST00000379446 HMG20BQ9P0W2 317 aa7.29□□□□□ -1.24
NEDD9-202ENST00000379446 SERPINA10Q9UK55 444 aa7.29□□□□□ -1.24
NEDD9-202ENST00000379446 DAGLAQ9Y4D2 1042 aa7.29□□□□□ -1.24
NEDD9-202ENST00000379446 ZNF541Q9H0D2 1346 aa7.29□□□□□ -1.24
NEDD9-202ENST00000379446 KDRP35968 1356 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 TYW5A2RUC4 315 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 CD19P15391 556 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 HOXA13P31271 388 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 CDK8P49336 464 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 ZNF165P49910 485 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 LRMPQ12912 555 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 CES5AQ6NT32 575 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 MIS18BP1Q6P0N0 1132 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 Q6ZUG5 572 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 IFNL3Q8IZI9 196 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 KRT222Q8N1A0 295 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 KBTBD3Q8NAB2 608 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 SLC44A5Q8NCS7 719 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 MNS1Q8NEH6 495 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 RBM28Q9NW13 759 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 TMEM51Q9NW97 253 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 TPRP12270 2363 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 SMCO2A6NFE2 343 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 CCNT1O60563 726 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 STAG3L1P0CL83 205 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 EEF2P13639 858 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 BTG3Q14201 252 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 NUDT18Q6ZVK8 323 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 FAM84BQ96KN1 310 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 SPDYE2BA6NHP3 402 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 ENTPD3O75355 529 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 SPDYE6P0CI01 402 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 GJC2Q5T442 439 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 HAUS3Q68CZ6 603 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 CDC42EP5Q6NZY7 148 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 DSTYKQ6XUX3 929 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 SEC62Q99442 399 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 OGFRQ9NZT2 677 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 KIF20BQ96Q89 1820 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 CXCL11O14625 94 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 NTSR2O95665 410 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 PGK2P07205 417 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 ASIC1P78348 528 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 MB21D1Q8N884 522 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 SEPT8Q92599 483 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 TEKT3Q9BXF9 490 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 IFIH1Q9BYX4 1025 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
NEDD9-202ENST00000379446 ANKFY1Q9P2R3 1169 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 FEM1BQ9UK73 627 aa7.28□□□□□ -1.24
NEDD9-202ENST00000379446 TMEM265A0A087WTH1 108 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 F5H6K3 240 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 GJB1P08034 283 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ERCC3P19447 782 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 CPT1AP50416 773 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 OSTNP61366 133 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 KLRC3Q07444 240 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 CHRDL2Q6WN34 429 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 CLMNQ96JQ2 1002 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 APOL5Q9BWW9 433 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 GBP1P32455 592 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ALDH7A1P49419 539 aaKnown RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 NEDD9Q14511 834 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 PTPROQ16827 1216 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 CACNA2D4Q7Z3S7 1137 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 SUGP1Q8IWZ8 645 aaKnown RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ZNF34Q8IZ26 560 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 TTC30BQ8N4P2 665 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ERCC4Q92889 916 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 LZTS2Q9BRK4 669 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 MOSPD1Q9UJG1 213 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 A0A087WWV3 80 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 PRKAB2O43741 272 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 TLL1O43897 1013 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 HSPD1P10809 573 aaKnown RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 CPB1P15086 417 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 DNAJB2P25686 324 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 IRX5P78411 483 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 AAK1Q2M2I8 961 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 NBPF20Q3BBV1 942 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ZNF589Q86UQ0 364 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 RYBPQ8N488 228 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ATG4CQ96DT6 458 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 ABHD8Q96I13 439 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 MROH7-TTC4A0A0A0MT08 1334 aa7.27□□□□□ -1.25
NEDD9-202ENST00000379446 BIN1O00499 593 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 IRF6O14896 467 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ATF7P17544 494 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-202ENST00000379446 STAT6P42226 847 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 CYP4A11Q02928 519 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 TMEM62Q0P6H9 643 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 APOBRQ0VD83 1088 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 VGLL4Q14135 290 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 PTPN14Q15678 1187 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ISM2Q6H9L7 571 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 OTUD6BQ8N6M0 293 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms