RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TMOD2Q9NZR1 351 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 PI4KBQ9UBF8 816 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 ADCY7P51828 1080 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 PRKG1Q13976 671 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 CCDC174Q6PII3 467 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 MTRQ99707 1265 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.14□□□□□ -0.472e-11■■□□□ 11.8
NEDD9-201ENST00000379433 SLC37A4O43826 429 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 CAPN2P17655 700 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 CTDP1Q9Y5B0 961 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-201ENST00000379433 TEX33O43247 280 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-201ENST00000379433 DGKZQ13574 1117 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 MRFAP1L1Q96HT8 127 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 PLCG1P19174 1290 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 ASIC1P78348 528 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 GABPAQ06546 454 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 DPYDQ12882 1025 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-201ENST00000379433 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 F5H6K3 240 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 KLRC3Q07444 240 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 RRP1BQ14684 758 aaKnown RBP12.13□□□□□ -0.47
NEDD9-201ENST00000379433 TIAM2Q8IVF5 1701 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 ZDHHC15Q96MV8 337 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 MED15Q96RN5 788 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
NEDD9-201ENST00000379433 SLX4Q8IY92 1834 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 CALCRLQ16602 461 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 CABP7Q86V35 215 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 MYH15Q9Y2K3 1946 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 NID2Q14112 1375 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 SYNRGQ9UMZ2 1314 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
NEDD9-201ENST00000379433 KANK3Q6NY19 840 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 ITFG2Q969R8 447 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 HOMER2Q9NSB8 354 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
NEDD9-201ENST00000379433 BMP15O95972 392 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 EGFRP00533 1210 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 CALRP27797 417 aaKnown RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 MORC3Q14149 939 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 NAA30Q147X3 362 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 DESI2Q9BSY9 194 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 SPZ1Q9BXG8 430 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 DISC1Q9NRI5 854 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 FAM170AA1A519 330 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 CFBP00751 764 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 LRWD1Q9UFC0 647 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 ADAMTSL1Q8N6G6 1762 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 RPN1P04843 607 aaKnown RBP12.11□□□□□ -0.47
NEDD9-201ENST00000379433 STAT3P40763 770 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 IRF5Q13568 498 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 STYK1Q6J9G0 422 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 SARM1Q6SZW1 724 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 LRRC15Q8TF66 581 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 VTI1AQ96AJ9 217 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 FEZ1Q99689 392 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
NEDD9-201ENST00000379433 MYH1P12882 1939 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 A0A1W2PRG0 241 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 TPM3P06753 285 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 FCER1AP12319 257 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 LRRC41Q15345 812 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-201ENST00000379433 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 PCMTD1Q96MG8 357 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-201ENST00000379433 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 ROBO3Q96MS0 1386 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 N4BP3O15049 544 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 CHMP2AO43633 222 aa12.1□□□□□ -0.47
NEDD9-201ENST00000379433 NDUFB10O96000 172 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms