RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 PTK2Q05397 1052 aa12.21□□□□□ -0.45
RAD50-201ENST00000378823 RAB44Q7Z6P3 723 aaPredicted RBP12.21□□□□□ -0.45
RAD50-201ENST00000378823 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.46
RAD50-201ENST00000378823 TMOD1P28289 359 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 PPP1R13BQ96KQ4 1090 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.46
RAD50-201ENST00000378823 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 ALDH1B1P30837 517 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 CTSWP56202 376 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 BPIFB4P59827 614 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.46
RAD50-201ENST00000378823 MAP7D3Q8IWC1 876 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 ADCY9O60503 1353 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 KDRP35968 1356 aa12.21□□□□□ -0.46
RAD50-201ENST00000378823 GNGT2O14610 69 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 BTG4Q9NY30 223 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 CCNL1Q9UK58 526 aaPredicted RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 PCP11498 1178 aaKnown RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 JRKLQ9Y4A0 524 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 H7C0C1 242 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 ATP5OP48047 213 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 CMTR1Q8N1G2 835 aaKnown RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 FRMPD2Q68DX3 1309 aaPredicted RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 PALM3A6NDB9 673 aaPredicted RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 PDE1BQ01064 536 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 ARMCX5Q6P1M9 558 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 ARHGEF18Q6ZSZ5 1173 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 SLC39A2Q9NP94 309 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 CCPG1Q9ULG6 757 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 LAD1O00515 517 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 SUPT20HQ8NEM7 779 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 GPC4O75487 556 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 H2AFZP0C0S5 128 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 TMEM191BP0C7N4 346 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 YWHAGP61981 247 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAD50-201ENST00000378823 H2AFVQ71UI9 128 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 MLXIPQ9HAP2 919 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 TXLNGQ9NUQ3 528 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 TRIM11Q96F44 468 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 CNOT6LQ96LI5 555 aaKnown RBP12.2□□□□□ -0.46
RAD50-201ENST00000378823 MICAL3Q7RTP6 2002 aa12.2□□□□□ -0.46
RAD50-201ENST00000378823 TYW5A2RUC4 315 aaKnown RBP12.19□□□□□ -0.46
RAD50-201ENST00000378823 SCG2P13521 617 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 PDE6BP35913 854 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 C10orf76Q5T2E6 689 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
RAD50-201ENST00000378823 CCDC138Q96M89 665 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 MCF2LO15068 1137 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 IFNAR2P48551 515 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
RAD50-201ENST00000378823 EPHB4P54760 987 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 IL1RL1Q01638 556 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 FRMD3A2A2Y4 597 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 KLRF2D3W0D1 207 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 MYL7Q01449 175 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 CCHCR1Q8TD31 782 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 CUEDC2Q9H467 287 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 CNOT10Q9H9A5 744 aaKnown RBP12.19□□□□□ -0.46
RAD50-201ENST00000378823 MORC4Q8TE76 937 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 USP28Q96RU2 1077 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 CDC23Q9UJX2 597 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 USP19O94966 1318 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 IQCB1Q15051 598 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 FANCBQ8NB91 859 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 RETREG2Q8NC44 543 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
RAD50-201ENST00000378823 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
RAD50-201ENST00000378823 LRRIQ4A6NIV6 560 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 NEURL1BA8MQ27 555 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 MESDQ14696 234 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 NAA35Q5VZE5 725 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 TTC1Q99614 292 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 PHLPP2Q6ZVD8 1323 aa12.18□□□□□ -0.46
RAD50-201ENST00000378823 MCF2L2Q86YR7 1114 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms