RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 RANBP17Q9H2T7 1088 aaKnown RBP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 TTYH1Q9H313 450 aaPredicted RBP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 PDGFCQ9NRA1 345 aa16.05■□□□□ 0.16
PRPF18-202ENST00000378572 ADD3Q9UEY8 706 aaKnown RBP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 SMPD1P17405 629 aa16.05■□□□□ 0.16
PRPF18-202ENST00000378572 PTGS1P23219 599 aa16.05■□□□□ 0.16
PRPF18-202ENST00000378572 CALML3P27482 149 aa16.05■□□□□ 0.16
PRPF18-202ENST00000378572 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 FAM126BQ8IXS8 530 aa16.05■□□□□ 0.16
PRPF18-202ENST00000378572 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.04■□□□□ 0.16
PRPF18-202ENST00000378572 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.04■□□□□ 0.16
PRPF18-202ENST00000378572 CABYRO75952 493 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 ACRP10323 421 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 CSF2RAP15509 400 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 DNAJB2P25686 324 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 CDK7P50613 346 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 BAATQ14032 418 aaPredicted RBP16.04■□□□□ 0.16
PRPF18-202ENST00000378572 NECTIN1Q15223 517 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 KCNB2Q92953 911 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
PRPF18-202ENST00000378572 ASTN1O14525 1302 aa16.04■□□□□ 0.16
PRPF18-202ENST00000378572 NFIBO00712 420 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 CYP2C18P33260 490 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 AKNAD1Q5T1N1 836 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 IQSEC1Q6DN90 963 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
PRPF18-202ENST00000378572 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
PRPF18-202ENST00000378572 KIF2CQ99661 725 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 RNF41Q9H4P4 317 aaPredicted RBP16.03■□□□□ 0.16
PRPF18-202ENST00000378572 GNEQ9Y223 722 aaKnown RBP16.03■□□□□ 0.16
PRPF18-202ENST00000378572 RBM8AQ9Y5S9 174 aaKnown RBP16.03■□□□□ 0.16
PRPF18-202ENST00000378572 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 CUL9Q8IWT3 2517 aa16.03■□□□□ 0.16
PRPF18-202ENST00000378572 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 CTAGE5O15320 804 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 ALDH5A1P51649 535 aaPredicted RBP16.02■□□□□ 0.16
PRPF18-202ENST00000378572 PSMC6P62333 389 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 SLC30A10Q6XR72 485 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 TBC1D10CQ8IV04 446 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 TIFAQ96CG3 184 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 HIPK3Q9H422 1215 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
PRPF18-202ENST00000378572 PDHBP11177 359 aa16.02■□□□□ 0.15
PRPF18-202ENST00000378572 PDE4DQ08499 809 aa16.02■□□□□ 0.15
PRPF18-202ENST00000378572 RNF20Q5VTR2 975 aa16.02■□□□□ 0.15
PRPF18-202ENST00000378572 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.15
PRPF18-202ENST00000378572 ESR2Q92731 530 aa16.02■□□□□ 0.15
PRPF18-202ENST00000378572 MTIF3Q9H2K0 278 aaKnown RBP16.02■□□□□ 0.15
PRPF18-202ENST00000378572 LCTP09848 1927 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 LAMA4Q16363 1823 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 NEDD4P46934 1319 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 ZNF213O14771 459 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 MYL3P08590 195 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 FGRP09769 529 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 NOVP48745 357 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 USH1GQ495M9 461 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 TMEM240Q5SV17 173 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 TAPT1Q6NXT6 567 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 BTNL9Q6UXG8 535 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 OR6J1Q8NGC5 347 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 WDR11Q9BZH6 1224 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 GPHNQ9NQX3 736 aaPredicted RBP16.01■□□□□ 0.15
PRPF18-202ENST00000378572 TCP11L1Q9NUJ3 509 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 PNMA2Q9UL42 364 aa16.01■□□□□ 0.15
PRPF18-202ENST00000378572 DHX16O60231 1041 aaKnown RBP16■□□□□ 0.15
PRPF18-202ENST00000378572 GOLGA8HP0CJ92 632 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 PCP11498 1178 aaKnown RBP16■□□□□ 0.15
PRPF18-202ENST00000378572 CCL23P55773 120 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 ZNF543Q08ER8 600 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 RABEP1Q15276 862 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 TSGA10IPQ3SY00 556 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 FAM47CQ5HY64 1035 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 TMEM63BQ5T3F8 832 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 COL25A1Q9BXS0 654 aaPredicted RBP16■□□□□ 0.15
PRPF18-202ENST00000378572 TRPV6Q9H1D0 765 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 UNC80Q8N2C7 3258 aa16■□□□□ 0.15
PRPF18-202ENST00000378572 GRXCR1A8MXD5 290 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 CPT1AP50416 773 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 CHMP4BP1P59074 171 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 GRIN2CQ14957 1233 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
PRPF18-202ENST00000378572 ZNF576Q9H609 170 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 IL23AQ9NPF7 189 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 POLR3EQ9NVU0 708 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 Q9Y3F1 56 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 UMODL1Q5DID0 1318 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 SLC27A2O14975 620 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 B4GALT4O60513 344 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 CD4P01730 458 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 NKX3-2P78367 333 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 PPP2R5BQ15173 497 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms