RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 SCLYQ96I15 445 aa23.15■■□□□ 1.3
CCDC107-202ENST00000378406 ALDH8A1Q9H2A2 487 aaPredicted RBP23.15■■□□□ 1.3
CCDC107-202ENST00000378406 MRPS5P82675 430 aaKnown RBP23.14■■□□□ 1.29
CCDC107-202ENST00000378406 DUSP28Q4G0W2 176 aa23.14■■□□□ 1.29
CCDC107-202ENST00000378406 RPUSD2Q8IZ73 545 aaKnown RBP23.14■■□□□ 1.29
CCDC107-202ENST00000378406 ADAMTS19Q8TE59 1207 aa23.14■■□□□ 1.29
CCDC107-202ENST00000378406 RANBP17Q9H2T7 1088 aaKnown RBP23.14■■□□□ 1.29
CCDC107-202ENST00000378406 MTMR7Q9Y216 660 aa23.14■■□□□ 1.29
CCDC107-202ENST00000378406 SLC4A7Q9Y6M7 1214 aa23.14■■□□□ 1.29
CCDC107-202ENST00000378406 MYOGP15173 224 aa23.13■■□□□ 1.29
CCDC107-202ENST00000378406 BAATQ14032 418 aaPredicted RBP23.13■■□□□ 1.29
CCDC107-202ENST00000378406 CCDC96Q2M329 555 aa23.13■■□□□ 1.29
CCDC107-202ENST00000378406 TTBK2Q6IQ55 1244 aa23.13■■□□□ 1.29
CCDC107-202ENST00000378406 DCAF4Q8WV16 495 aa23.13■■□□□ 1.29
CCDC107-202ENST00000378406 TRMT13Q9NUP7 481 aaKnown RBP23.13■■□□□ 1.29
CCDC107-202ENST00000378406 ANAPC4Q9UJX5 808 aa23.13■■□□□ 1.29
CCDC107-202ENST00000378406 REV3LO60673 3130 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 RANBP6O60518 1105 aaKnown RBP23.12■■□□□ 1.29
CCDC107-202ENST00000378406 COL9A1P20849 921 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 SLC16A2P36021 539 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 ALDH5A1P51649 535 aaPredicted RBP23.12■■□□□ 1.29
CCDC107-202ENST00000378406 PPP2R2DQ66LE6 453 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 BTNL9Q6UXG8 535 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 ADD3Q9UEY8 706 aaKnown RBP23.12■■□□□ 1.29
CCDC107-202ENST00000378406 PCDHB15Q9Y5E8 787 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 PCDHA11Q9Y5I1 949 aa23.12■■□□□ 1.29
CCDC107-202ENST00000378406 NFIBO00712 420 aa23.11■■□□□ 1.29
CCDC107-202ENST00000378406 ORC4O43929 436 aa23.11■■□□□ 1.29
CCDC107-202ENST00000378406 CYP2C9P11712 490 aa23.11■■□□□ 1.29
CCDC107-202ENST00000378406 PURAQ00577 322 aaKnown RBP23.11■■□□□ 1.29
CCDC107-202ENST00000378406 VPS53Q5VIR6 699 aa23.11■■□□□ 1.29
CCDC107-202ENST00000378406 WDR11Q9BZH6 1224 aa23.11■■□□□ 1.29
CCDC107-202ENST00000378406 POLR3EQ9NVU0 708 aa23.11■■□□□ 1.29
CCDC107-202ENST00000378406 TNKSO95271 1327 aa23.1■■□□□ 1.29
CCDC107-202ENST00000378406 LOC102724159A0A0B4J2E5 919 aa23.1■■□□□ 1.29
CCDC107-202ENST00000378406 RBM47A0AV96 593 aaKnown RBP23.1■■□□□ 1.29
CCDC107-202ENST00000378406 ZBBXA8MT70 800 aa23.1■■□□□ 1.29
CCDC107-202ENST00000378406 FGRP09769 529 aa23.1■■□□□ 1.29
CCDC107-202ENST00000378406 ATP2A2P16615 1042 aaKnown RBP23.1■■□□□ 1.29
CCDC107-202ENST00000378406 TTLL4Q14679 1199 aa23.1■■□□□ 1.29
CCDC107-202ENST00000378406 PWP2Q15269 919 aaKnown RBP23.1■■□□□ 1.29
CCDC107-202ENST00000378406 SYDE2Q5VT97 1194 aa23.1■■□□□ 1.29
CCDC107-202ENST00000378406 SCN5AQ14524 2016 aa23.09■■□□□ 1.29
CCDC107-202ENST00000378406 PFKMP08237 780 aa23.09■■□□□ 1.29
CCDC107-202ENST00000378406 SUPT20HL2P0C7V6 817 aa23.09■■□□□ 1.29
CCDC107-202ENST00000378406 MX1P20591 662 aa23.09■■□□□ 1.29
CCDC107-202ENST00000378406 UHRF1Q96T88 793 aaPredicted RBP23.09■■□□□ 1.29
CCDC107-202ENST00000378406 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
CCDC107-202ENST00000378406 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.29
CCDC107-202ENST00000378406 PTPDC1A2A3K4 754 aa23.08■■□□□ 1.29
CCDC107-202ENST00000378406 MYL3P08590 195 aa23.08■■□□□ 1.29
CCDC107-202ENST00000378406 CPT1AP50416 773 aa23.08■■□□□ 1.29
CCDC107-202ENST00000378406 SLC30A10Q6XR72 485 aa23.08■■□□□ 1.29
CCDC107-202ENST00000378406 CLEC4DQ8WXI8 215 aa23.08■■□□□ 1.29
CCDC107-202ENST00000378406 MTG1Q9BT17 334 aaPredicted RBP23.08■■□□□ 1.29
CCDC107-202ENST00000378406 NCOR1O75376 2440 aa23.08■■□□□ 1.28
CCDC107-202ENST00000378406 FRMPD2Q68DX3 1309 aaPredicted RBP23.08■■□□□ 1.28
CCDC107-202ENST00000378406 ALX1Q15699 326 aa23.07■■□□□ 1.28
CCDC107-202ENST00000378406 DEFB128Q7Z7B8 93 aa23.07■■□□□ 1.28
CCDC107-202ENST00000378406 OR6J1Q8NGC5 347 aa23.07■■□□□ 1.28
CCDC107-202ENST00000378406 TMEM47Q9BQJ4 181 aa23.07■■□□□ 1.28
CCDC107-202ENST00000378406 GPCPD1Q9NPB8 672 aa23.07■■□□□ 1.28
CCDC107-202ENST00000378406 TOP1P11387 765 aaKnown RBP23.06■■□□□ 1.28
CCDC107-202ENST00000378406 MICALL1Q8N3F8 863 aa23.06■■□□□ 1.28
CCDC107-202ENST00000378406 IL27Q8NEV9 243 aa23.06■■□□□ 1.28
CCDC107-202ENST00000378406 TSPYL2Q9H2G4 693 aaPredicted RBP23.06■■□□□ 1.28
CCDC107-202ENST00000378406 TRANK1O15050 2925 aa23.06■■□□□ 1.28
CCDC107-202ENST00000378406 CA3P07451 260 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 CALML3P27482 149 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 NBPF20Q3BBV1 942 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 TMEM67Q5HYA8 995 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 RNF207Q6ZRF8 634 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 PPP1R13LQ8WUF5 828 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 GPHNQ9NQX3 736 aaPredicted RBP23.05■■□□□ 1.28
CCDC107-202ENST00000378406 TOMM22Q9NS69 142 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 TCP11L1Q9NUJ3 509 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 RAPGEFL1Q9UHV5 662 aa23.05■■□□□ 1.28
CCDC107-202ENST00000378406 TCF20Q9UGU0 1960 aaKnown RBP23.04■■□□□ 1.28
CCDC107-202ENST00000378406 PDHBP11177 359 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 BMP1P13497 986 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 EDNRBP24530 442 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 TFF2Q03403 129 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 PPP2R5BQ15173 497 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 FAM47CQ5HY64 1035 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 RRP12Q5JTH9 1297 aaKnown RBP23.04■■□□□ 1.28
CCDC107-202ENST00000378406 TANC1Q9C0D5 1861 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 XIRP2A4UGR9 3374 aa23.04■■□□□ 1.28
CCDC107-202ENST00000378406 PRRC2BQ5JSZ5 2229 aaKnown RBP23.03■■□□□ 1.28
CCDC107-202ENST00000378406 RFXAPO00287 272 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 NKRFO15226 690 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCDC107-202ENST00000378406 FGAP02671 866 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 POU3F3P20264 500 aaPredicted RBP23.03■■□□□ 1.28
CCDC107-202ENST00000378406 RFC2P35250 354 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 RPS6P62753 249 aaKnown RBP23.03■■□□□ 1.28
CCDC107-202ENST00000378406 PDE4DQ08499 809 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 NFRKBQ6P4R8 1299 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 COPS5Q92905 334 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 EVI5LQ96CN4 794 aa23.03■■□□□ 1.28
CCDC107-202ENST00000378406 NECAB3Q96P71 396 aaPredicted RBP23.03■■□□□ 1.28
CCDC107-202ENST00000378406 HELLSQ9NRZ9 838 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms