RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 GNA14O95837 355 aa15.41■□□□□ 0.06
TRIM13-202ENST00000378182 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
TRIM13-202ENST00000378182 BFSP1Q12934 665 aa15.41■□□□□ 0.06
TRIM13-202ENST00000378182 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
TRIM13-202ENST00000378182 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
TRIM13-202ENST00000378182 DPH5Q9H2P9 285 aa15.41■□□□□ 0.06
TRIM13-202ENST00000378182 KRIT1O00522 736 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 PDCD6IPQ8WUM4 868 aaKnown RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 EXT2Q93063 718 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 XPOTO43592 962 aaKnown RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 U2AF2P26368 475 aaKnown RBP eCLIP15.4■□□□□ 0.069e-7■■□□□ 13.7
TRIM13-202ENST00000378182 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 RAB44Q7Z6P3 723 aaPredicted RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 KIAA1024Q9UPX6 916 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 DNAAF3Q8N9W5 541 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 CARD6Q9BX69 1037 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 ZNF215Q9UL58 517 aaPredicted RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 ZBTB41Q5SVQ8 909 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 FASTKD5Q7L8L6 764 aaKnown RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 ZNF513Q8N8E2 541 aaPredicted RBP15.4■□□□□ 0.06
TRIM13-202ENST00000378182 PNMA6EA0A0J9YXQ4 647 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 POC1B-GALNT4F8VUJ3 575 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 DPYSL4O14531 572 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 FGD4Q96M96 766 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 KCNG1Q9UIX4 513 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 ZNF148Q9UQR1 794 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 STX2P32856 288 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 MORC3Q14149 939 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 IFNL3Q8IZI9 196 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 WDR48Q8TAF3 677 aa15.4■□□□□ 0.06
TRIM13-202ENST00000378182 SESN3P58005 492 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 KBTBD3Q8NAB2 608 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 ZNF496Q96IT1 587 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-202ENST00000378182 NDUFAB1O14561 156 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 CD58P19256 250 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 ELMSAN1Q6PJG2 1045 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 KRT26Q7Z3Y9 468 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 MAIP1Q8WWC4 291 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 SUGT1Q9Y2Z0 365 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 GNGT2O14610 69 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 MGEA5O60502 916 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 NEURL1BA8MQ27 555 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 KCNJ18B7U540 433 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 NEMP1O14524 444 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 ZBTB7AO95365 584 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 NOP14P78316 857 aaKnown RBP15.39■□□□□ 0.05
TRIM13-202ENST00000378182 KCNJ12Q14500 433 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 ODR4Q5SWX8 454 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 CFAP36Q96G28 342 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 SERPINB2P05120 415 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 LRGUKQ96M69 825 aa15.39■□□□□ 0.05
TRIM13-202ENST00000378182 EIF2AK4Q9P2K8 1649 aaKnown RBP15.39■□□□□ 0.05
TRIM13-202ENST00000378182 GSTA4O15217 222 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 C21orf2O43822 256 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 ZNF853P0CG23 659 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 SRGAP2BP0DMP2 458 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 STAT2P52630 851 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 YWHAGP61981 247 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 TACO1Q9BSH4 297 aaKnown RBP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 NSUN2Q08J23 767 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 YIPF2Q9BWQ6 316 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 CLIC2O15247 247 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 CDO1Q16878 200 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 ADD3Q9UEY8 706 aaKnown RBP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 RGS16O15492 202 aaPredicted RBP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 P3H4Q92791 437 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 NFE2L3Q9Y4A8 694 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 KCNQ3O43525 872 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 MESDQ14696 234 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 LRRC4Q9HBW1 653 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 CXorf38Q8TB03 319 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 CEP170P1Q96L14 293 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 GREM2Q9H772 168 aa15.38■□□□□ 0.05
TRIM13-202ENST00000378182 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM13-202ENST00000378182 PPFIA4O75335 1185 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 SERPINB6P35237 376 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ADCY1Q08828 1119 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 NEK8Q86SG6 692 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 SDCCAG3Q96C92 435 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 TTC25Q96NG3 672 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 CTTNBP2Q8WZ74 1663 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 HNRNPCL2B2RXH8 293 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 HNRNPCL1O60812 293 aaKnown RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 LRRN2O75325 713 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ATF2P15336 505 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 KRT71Q3SY84 523 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 NLGN1Q8N2Q7 840 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 KCTD6Q8NC69 237 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 SUFUQ9UMX1 484 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ATP8B3O60423 1300 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 TTC1Q99614 292 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms