RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TEKT3Q9BXF9 490 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 FAM170AA1A519 330 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 CEP104O60308 925 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 HPDP32754 393 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-201ENST00000378156 CYP2J2P51589 502 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 PPARDQ03181 441 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 XKR9Q5GH70 373 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 INTS8Q75QN2 995 aaKnown RBP16.53■□□□□ 0.24
NPHP4-201ENST00000378156 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 SLC35F6Q8N357 371 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 DEPTORQ8TB45 409 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 HAUS4Q9H6D7 363 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-201ENST00000378156 DCPSQ96C86 337 aaKnown RBP16.53■□□□□ 0.24
NPHP4-201ENST00000378156 MAK16Q9BXY0 300 aaKnown RBP16.53■□□□□ 0.24
NPHP4-201ENST00000378156 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
NPHP4-201ENST00000378156 TNNI1P19237 187 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 ARHGAP44Q17R89 818 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 UBL4BQ8N7F7 174 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 TTC16Q8NEE8 873 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 BRIP1Q9BX63 1249 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 PRPF3O43395 683 aaKnown RBP16.52■□□□□ 0.24
NPHP4-201ENST00000378156 GDF11O95390 407 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 PIGSQ96S52 555 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 MAGEF1Q9HAY2 307 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 ANAPC4Q9UJX5 808 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 COL15A1P39059 1388 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 CD19P15391 556 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 SLC16A2P36021 539 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 RUFY4Q6ZNE9 571 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 CACNA2D3Q8IZS8 1091 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 CUEDC2Q9H467 287 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 SERPINA10Q9UK55 444 aa16.52■□□□□ 0.24
NPHP4-201ENST00000378156 RFX7Q2KHR2 1363 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 NOL3O60936 208 aaKnown RBP16.52■□□□□ 0.23
NPHP4-201ENST00000378156 ATP2A2P16615 1042 aaKnown RBP16.52■□□□□ 0.23
NPHP4-201ENST00000378156 FAM102BQ5T8I3 360 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 CEP128Q6ZU80 1094 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 IFT20Q8IY31 132 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 STMN2Q93045 179 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 AK8Q96MA6 479 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 GPR101Q96P66 508 aaPredicted RBP16.52■□□□□ 0.23
NPHP4-201ENST00000378156 HINFPQ9BQA5 517 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 TRIM31Q9BZY9 425 aa16.52■□□□□ 0.23
NPHP4-201ENST00000378156 SOWAHDA6NJG2 315 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 CDC27P30260 824 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 STAT1P42224 750 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 NT5C2P49902 561 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 PABPC4Q13310 644 aaKnown RBP eCLIP16.51■□□□□ 0.23
NPHP4-201ENST00000378156 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 BMP3P12645 472 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 RESP18Q5W5W9 173 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 GOLGA5Q8TBA6 731 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 TUBGCP2Q9BSJ2 902 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 KCNK9Q9NPC2 374 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 CDC23Q9UJX2 597 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 KIAA1024Q9UPX6 916 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 TBCKQ8TEA7 893 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 CELF1Q92879 486 aaKnown RBP16.51■□□□□ 0.23
NPHP4-201ENST00000378156 LSM14BQ9BX40 385 aaKnown RBP16.51■□□□□ 0.23
NPHP4-201ENST00000378156 C1orf167Q5SNV9 1468 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 ENC1O14682 589 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 PRDX5P30044 214 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 CFAP221Q4G0U5 840 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.51■□□□□ 0.23
NPHP4-201ENST00000378156 AGTPBP1Q9UPW5 1226 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 AFF2P51816 1311 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 ZNF609O15014 1411 aa16.51■□□□□ 0.23
NPHP4-201ENST00000378156 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
NPHP4-201ENST00000378156 ADRA2BP18089 450 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 CDK8P49336 464 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-201ENST00000378156 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 GADL1Q6ZQY3 521 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 TRIM58Q8NG06 486 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 RABGGTAQ92696 567 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 PAGE5Q96GU1 130 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 ACTN4O43707 911 aaKnown RBP16.5■□□□□ 0.23
NPHP4-201ENST00000378156 KRT19P08727 400 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 TAF12Q16514 161 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 DCUN1D2Q6PH85 259 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 ACRBPQ8NEB7 543 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 CNOT6LQ96LI5 555 aaKnown RBP16.5■□□□□ 0.23
NPHP4-201ENST00000378156 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 PTPREP23469 700 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 CASP1P29466 404 aa16.5■□□□□ 0.23
NPHP4-201ENST00000378156 CLNS1AP54105 237 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms