RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 IFIH1Q9BYX4 1025 aaKnown RBP20.06■□□□□ 0.8
GNE-201ENST00000377902 KIF5BP33176 963 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 SPA17Q15506 151 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 TSEN2Q8NCE0 465 aaKnown RBP20.05■□□□□ 0.8
GNE-201ENST00000377902 NUP58Q9BVL2 599 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 CCSER1Q9C0I3 900 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 SEMA6BQ9H3T3 888 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 MAD2L2Q9UI95 211 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 PCDHA13Q9Y5I0 950 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 A0A1B0GUL6 1792 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 ANO9A1A5B4 782 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 PCP11498 1178 aaKnown RBP20.05■□□□□ 0.8
GNE-201ENST00000377902 KIAA0895Q8NCT3 520 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 SPATA4Q8NEY3 305 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 FAM184BQ9ULE4 1060 aa20.05■□□□□ 0.8
GNE-201ENST00000377902 EIF4A3P38919 411 aaKnown RBP20.04■□□□□ 0.8
GNE-201ENST00000377902 TECP42680 631 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 ITPK1Q13572 414 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 LETM2Q2VYF4 491 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 PARP10Q53GL7 1025 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 CRNKL1Q9BZJ0 848 aaKnown RBP20.04■□□□□ 0.8
GNE-201ENST00000377902 EXOC5O00471 708 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 UBE4AQ14139 1066 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 BICDL1Q6ZP65 573 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 CCDC155Q8N6L0 562 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 SLC44A5Q8NCS7 719 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 SH2D4AQ9H788 454 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 JRKLQ9Y4A0 524 aa20.04■□□□□ 0.8
GNE-201ENST00000377902 CCNT1O60563 726 aaKnown RBP20.03■□□□□ 0.8
GNE-201ENST00000377902 KIF11P52732 1056 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 IPO4Q8TEX9 1081 aaKnown RBP20.03■□□□□ 0.8
GNE-201ENST00000377902 MS4A14Q96JA4 679 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 OSBPL9Q96SU4 736 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 EFCC1Q9HA90 598 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 SHOX2O60902 331 aaPredicted RBP20.03■□□□□ 0.8
GNE-201ENST00000377902 ZPR1O75312 459 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 ADAMTS2O95450 1211 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 RETREG2Q8NC44 543 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 ARL8AQ96BM9 186 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 MMRN2Q9H8L6 949 aa20.03■□□□□ 0.8
GNE-201ENST00000377902 STXBP3O00186 592 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 DNA2P51530 1060 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 TMC4Q7Z404 712 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 SLC51AQ86UW1 340 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 ZSCAN29Q8IWY8 852 aaPredicted RBP20.02■□□□□ 0.8
GNE-201ENST00000377902 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 BUB1O43683 1085 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 MMGT1Q8N4V1 131 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 TRIM58Q8NG06 486 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 NOC3LQ8WTT2 800 aaKnown RBP20.02■□□□□ 0.8
GNE-201ENST00000377902 ERGIC2Q96RQ1 377 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 DEF6Q9H4E7 631 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 PLAGL2Q9UPG8 496 aa20.02■□□□□ 0.8
GNE-201ENST00000377902 TACC1O75410 805 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 RRAGAQ7L523 313 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 TXNRD3Q86VQ6 643 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 SH3GLB2Q9NR46 395 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 TCP11L1Q9NUJ3 509 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 BICDL2A1A5D9 508 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 LRRC53A6NM62 1247 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 GFPT1Q06210 699 aaPredicted RBP20.01■□□□□ 0.79
GNE-201ENST00000377902 DYMQ7RTS9 669 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 MICALL1Q8N3F8 863 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 BCAS4Q8TDM0 211 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 PPM1EQ8WY54 764 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 MMTAG2Q9BU76 263 aaKnown RBP20.01■□□□□ 0.79
GNE-201ENST00000377902 CAPS2Q9BXY5 557 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 ATP8A2Q9NTI2 1148 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 BSDC1Q9NW68 430 aaPredicted RBP20.01■□□□□ 0.79
GNE-201ENST00000377902 STX8Q9UNK0 236 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 SAMM50Q9Y512 469 aa20.01■□□□□ 0.79
GNE-201ENST00000377902 ZSCAN5CA6NGD5 496 aaPredicted RBP20■□□□□ 0.79
GNE-201ENST00000377902 AKR1B10O60218 316 aa20■□□□□ 0.79
GNE-201ENST00000377902 GNGT1P63211 74 aa20■□□□□ 0.79
GNE-201ENST00000377902 KCTD19Q17RG1 926 aaPredicted RBP20■□□□□ 0.79
GNE-201ENST00000377902 TTMPQ5BVD1 217 aa20■□□□□ 0.79
GNE-201ENST00000377902 HAUS3Q68CZ6 603 aa20■□□□□ 0.79
GNE-201ENST00000377902 KCTD16Q68DU8 428 aa20■□□□□ 0.79
GNE-201ENST00000377902 FBXO33Q7Z6M2 555 aa20■□□□□ 0.79
GNE-201ENST00000377902 FNBP4Q8N3X1 1017 aaPredicted RBP20■□□□□ 0.79
GNE-201ENST00000377902 SH2D3CQ8N5H7 860 aa20■□□□□ 0.79
GNE-201ENST00000377902 GLIS3Q8NEA6 775 aa20■□□□□ 0.79
GNE-201ENST00000377902 RBM12Q9NTZ6 932 aaKnown RBP20■□□□□ 0.79
GNE-201ENST00000377902 BARHL2Q9NY43 387 aa20■□□□□ 0.79
GNE-201ENST00000377902 SIK3Q9Y2K2 1263 aa20■□□□□ 0.79
GNE-201ENST00000377902 GRIN2DO15399 1336 aa20■□□□□ 0.79
GNE-201ENST00000377902 ABCA3Q99758 1704 aa20■□□□□ 0.79
GNE-201ENST00000377902 USO1O60763 962 aaKnown RBP20■□□□□ 0.79
GNE-201ENST00000377902 MYL1P05976 194 aa20■□□□□ 0.79
GNE-201ENST00000377902 LIG3P49916 1009 aa20■□□□□ 0.79
GNE-201ENST00000377902 RASSF7Q02833 373 aa20■□□□□ 0.79
GNE-201ENST00000377902 VWA3BQ502W6 1294 aa20■□□□□ 0.79
GNE-201ENST00000377902 AMOTL1Q8IY63 956 aa20■□□□□ 0.79
GNE-201ENST00000377902 TSGA10Q9BZW7 698 aa20■□□□□ 0.79
GNE-201ENST00000377902 NDST4Q9H3R1 872 aa20■□□□□ 0.79
GNE-201ENST00000377902 ARPP21Q9UBL0 812 aaPredicted RBP20■□□□□ 0.79
GNE-201ENST00000377902 PHLPP1O60346 1717 aa20■□□□□ 0.79
GNE-201ENST00000377902 ESYT3A0FGR9 886 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 OR52Z1P0C646 297 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 KCNQ4P56696 695 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms