RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
CBWD1-204ENST00000377447 ANKRD7Q92527 254 aa11.15□□□□□ -0.62
CBWD1-204ENST00000377447 CUL5Q93034 780 aa11.15□□□□□ -0.62
CBWD1-204ENST00000377447 PSTPIP2Q9H939 334 aa11.15□□□□□ -0.62
CBWD1-204ENST00000377447 LZTFL1Q9NQ48 299 aa11.15□□□□□ -0.62
CBWD1-204ENST00000377447 PI4KBQ9UBF8 816 aa11.15□□□□□ -0.62
CBWD1-204ENST00000377447 MYH7BA7E2Y1 1941 aa11.15□□□□□ -0.62
CBWD1-204ENST00000377447 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 FCER1AP12319 257 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 SNAP25P60880 206 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 SPAG1Q07617 926 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 STK4Q13043 487 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 SEPT2Q15019 361 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 DACT2Q5SW24 774 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 TRIM65Q6PJ69 517 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 USP17L6PQ6QN14 398 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 DYMQ7RTS9 669 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 DHX36Q9H2U1 1008 aaKnown RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 FAM198AQ9UFP1 575 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 H7C1D1 291 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 MFAP3LO75121 409 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 MYL1P05976 194 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 PBX1P40424 430 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 MRPL12P52815 198 aaKnown RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 KCNB1Q14721 858 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 ELF2Q15723 593 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 CSGALNACT2Q8N6G5 542 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 CCDC47Q96A33 483 aaKnown RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 RIC8AQ9NPQ8 531 aa11.14□□□□□ -0.63
CBWD1-204ENST00000377447 LIMA1Q9UHB6 759 aaKnown RBP11.14□□□□□ -0.63
CBWD1-204ENST00000377447 FANCGO15287 622 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 C21orf2O43822 256 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 CCDC175P0C221 793 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 IDEP14735 1019 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 AMPD3Q01432 767 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 CNGA4Q8IV77 575 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 LRRN4CLQ8ND94 238 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 SNX29Q8TEQ0 813 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 MTMR9Q96QG7 549 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 PANX2Q96RD6 677 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 RAB34Q9BZG1 259 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-204ENST00000377447 CUEDC2Q9H467 287 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 SLC39A2Q9NP94 309 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
CBWD1-204ENST00000377447 PCDHA1Q9Y5I3 950 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 LRRC10BA6NIK2 292 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 ICA1Q05084 483 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 MCM6Q14566 821 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 RAD9BQ6WBX8 426 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 IRF2BP1Q8IU81 584 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 WDR24Q96S15 920 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 EHD4Q9H223 541 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-204ENST00000377447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.13□□□□□ -0.63
CBWD1-204ENST00000377447 MYO3BQ8WXR4 1341 aa11.13□□□□□ -0.63
CBWD1-204ENST00000377447 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-204ENST00000377447 PPIP5K2O43314 1243 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 EDIL3O43854 480 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 DPEP1P16444 411 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 ERCC3P19447 782 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 ERCC6LQ2NKX8 1250 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 USH1GQ495M9 461 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 LARP4BQ92615 738 aaKnown RBP11.12□□□□□ -0.63
CBWD1-204ENST00000377447 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
CBWD1-204ENST00000377447 PHLPP2Q6ZVD8 1323 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
CBWD1-204ENST00000377447 KRT9P35527 623 aa11.12□□□□□ -0.63
CBWD1-204ENST00000377447 GRB10Q13322 594 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms