RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CFAP221Q4G0U5 840 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 LINC00301Q8NCQ3 95 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 NACC1Q96RE7 527 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 NACA2Q9H009 215 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 NBPF26B4DH59 902 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 NDC80O14777 642 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 ADKP55263 362 aaKnown RBP19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 RNASE9P60153 205 aaKnown RBP19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 NBPF10Q6P3W6 841 aaKnown RBP19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 NBPF15Q8N660 670 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 CPDO75976 1380 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 PALM3A6NDB9 673 aaPredicted RBP19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 CCND2P30279 289 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 EXOC8Q8IYI6 725 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 ANKS4BQ8N8V4 417 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 U2AF1L4Q8WU68 220 aaKnown RBP19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 MRFAP1L1Q96HT8 127 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 IGSF3O75054 1194 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 UBXN2AP68543 259 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 CCDC125Q86Z20 511 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 MYO1AQ9UBC5 1043 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 PPRC1Q5VV67 1664 aaKnown RBP19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 TMEM191BP0C7N4 346 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 NR5A1Q13285 461 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 LONRF3Q496Y0 759 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 GABPB2Q8TAK5 448 aaPredicted RBP19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 DHTKD1Q96HY7 919 aaPredicted RBP19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 MTA3Q9BTC8 594 aa19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 SEPT9Q9UHD8 586 aaPredicted RBP19.67■□□□□ 0.74
CLSTN1-202ENST00000377298 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 CERKQ8TCT0 537 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 GPT2Q8TD30 523 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 DCAF4Q8WV16 495 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 SH3GLB2Q9NR46 395 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 ECE2O60344 883 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 IVLP07476 585 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 SLFN14P0C7P3 912 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 CARD6Q9BX69 1037 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 MIS12Q9H081 205 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 STIM2Q9P246 746 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 POMGNT1Q8WZA1 660 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 GJA10Q969M2 543 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 KCNK9Q9NPC2 374 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 BCORL1Q5H9F3 1711 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 ZBTB16Q05516 673 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 GPIHBP1Q8IV16 184 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 FEZ2Q9UHY8 353 aaPredicted RBP19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 AMFRQ9UKV5 643 aa19.66■□□□□ 0.74
CLSTN1-202ENST00000377298 ABCD1P33897 745 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 RC3H1Q5TC82 1133 aaKnown RBP19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 ASIC3Q9UHC3 531 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 DLATP10515 647 aaKnown RBP19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 NFIXQ14938 502 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 ZNF710Q8N1W2 664 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 RNF169Q8NCN4 708 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 TRIM58Q8NG06 486 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 FBF1Q8TES7 1133 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 CCDC127Q96BQ5 260 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 RIC8AQ9NPQ8 531 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 ALDH3A1P30838 453 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 C17orf53Q8N3J3 647 aaPredicted RBP19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 RETREG2Q8NC44 543 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 AP5M1Q9H0R1 490 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 WDR19Q8NEZ3 1342 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 PTPRMP28827 1452 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 SNAP23O00161 211 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 HNRNPDLO14979 420 aaKnown RBP19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 CD2BP2O95400 341 aaKnown RBP19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 GH2P01242 217 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 IGBP1P78318 339 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 SP8Q8IXZ3 490 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 PGBD1Q96JS3 809 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 ST7Q9NRC1 585 aa19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 INO80Q9ULG1 1556 aaPredicted RBP19.65■□□□□ 0.74
CLSTN1-202ENST00000377298 FOXO4P98177 505 aa19.64■□□□□ 0.74
CLSTN1-202ENST00000377298 RASA3Q14644 834 aa19.64■□□□□ 0.74
CLSTN1-202ENST00000377298 DAAM2Q86T65 1068 aa19.64■□□□□ 0.74
CLSTN1-202ENST00000377298 ZNF526Q8TF50 670 aaPredicted RBP19.64■□□□□ 0.74
CLSTN1-202ENST00000377298 HAUS2Q9NVX0 235 aa19.64■□□□□ 0.74
CLSTN1-202ENST00000377298 NKIRAS1Q9NYS0 192 aa19.64■□□□□ 0.74
CLSTN1-202ENST00000377298 CROCCP2Q86T23 111 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 PROCA1Q8NCQ7 364 aaPredicted RBP19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 GIMAP7Q8NHV1 300 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 RIOK1Q9BRS2 568 aaKnown RBP19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 ALX1Q15699 326 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 SEPT14Q6ZU15 432 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 NSMCE1Q8WV22 266 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 PLA2G12BQ9BX93 195 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 MROH7-TTC4A0A0A0MT08 1334 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 PDE6CP51160 858 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 TMTC3Q6ZXV5 915 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 GAS2L3Q86XJ1 694 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 ZNF341Q9BYN7 854 aa19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 SRPRBQ9Y5M8 271 aaKnown RBP19.64■□□□□ 0.73
CLSTN1-202ENST00000377298 MXRA7P84157 204 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 PPM1KQ8N3J5 372 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms