RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
TIMP1-202ENST00000377017 MCTP2Q6DN12 878 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 TYW1BQ6NUM6 668 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 ZNF296Q8WUU4 475 aaPredicted RBP15.12■□□□□ 0.01
TIMP1-202ENST00000377017 A1CFQ9NQ94 594 aaKnown RBP15.12■□□□□ 0.01
TIMP1-202ENST00000377017 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 PIK3CDO00329 1044 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 HSPA1AP0DMV8 641 aaKnown RBP15.11■□□□□ 0.01
TIMP1-202ENST00000377017 HSPA1BP0DMV9 641 aaKnown RBP15.11■□□□□ 0.01
TIMP1-202ENST00000377017 PTPREP23469 700 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 HSD17B4P51659 736 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 FOSBP53539 338 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
TIMP1-202ENST00000377017 GHRHRQ02643 423 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 GRB14Q14449 540 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 KRT40Q6A162 431 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 REXO1Q8N1G1 1221 aaKnown RBP15.11■□□□□ 0.01
TIMP1-202ENST00000377017 DAGLBQ8NCG7 672 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 NUDT12Q9BQG2 462 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 PHF20Q9BVI0 1012 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 EHMT1Q9H9B1 1298 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 CYP39A1Q9NYL5 469 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 PCDHA4Q9UN74 947 aa15.11■□□□□ 0.01
TIMP1-202ENST00000377017 ZNFX1Q9P2E3 1918 aaKnown RBP15.1■□□□□ 0.01
TIMP1-202ENST00000377017 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 OPLAHO14841 1288 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 MMP1P03956 469 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 ADORA2AP29274 412 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 KRT2P35908 639 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 CTCFP49711 727 aaPredicted RBP15.1■□□□□ 0.01
TIMP1-202ENST00000377017 AP3B2Q13367 1082 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
TIMP1-202ENST00000377017 BAATQ14032 418 aaPredicted RBP15.1■□□□□ 0.01
TIMP1-202ENST00000377017 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 FBXO18Q8NFZ0 1043 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 CD99L2Q8TCZ2 262 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
TIMP1-202ENST00000377017 KCNJ14Q9UNX9 436 aa15.1■□□□□ 0.01
TIMP1-202ENST00000377017 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 B4DLN1 442 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
TIMP1-202ENST00000377017 FOSP01100 380 aaPredicted RBP15.09■□□□□ 0.01
TIMP1-202ENST00000377017 RGS2P41220 211 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 MAP2K5Q13163 448 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 SLC30A10Q6XR72 485 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 DPP9Q86TI2 863 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
TIMP1-202ENST00000377017 ADD3Q9UEY8 706 aaKnown RBP15.09■□□□□ 0.01
TIMP1-202ENST00000377017 PLXNA1Q9UIW2 1896 aa15.08■□□□□ 0.01
TIMP1-202ENST00000377017 CASP8AP2Q9UKL3 1982 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 MEIS2O14770 477 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 FOXN1O15353 648 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 HSPA8P11142 646 aaKnown RBP15.08■□□□□ 0
TIMP1-202ENST00000377017 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0
TIMP1-202ENST00000377017 PRMT2P55345 433 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 GUCY1B3Q02153 619 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 UBE2SQ16763 222 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 MORN1Q5T089 497 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 DNERQ8NFT8 737 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 SYTL5Q8TDW5 730 aaPredicted RBP15.08■□□□□ 0
TIMP1-202ENST00000377017 TBC1D5Q92609 795 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 SHISA4Q96DD7 197 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 ARHGAP39Q9C0H5 1083 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 DIS3Q9Y2L1 958 aaKnown RBP15.08■□□□□ 0
TIMP1-202ENST00000377017 ZSWIM8A7E2V4 1837 aa15.08■□□□□ 0
TIMP1-202ENST00000377017 DOCK3Q8IZD9 2030 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 DNAJC25-GNG10A0A024R161 153 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 LOC102724159A0A0B4J2E5 919 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 VPS37CA5D8V6 355 aaPredicted RBP15.07■□□□□ 0
TIMP1-202ENST00000377017 SYT1P21579 422 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 CTGFP29279 349 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 PWP2Q15269 919 aaKnown RBP15.07■□□□□ 0
TIMP1-202ENST00000377017 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 FCHSD1Q86WN1 690 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
TIMP1-202ENST00000377017 FAM133AQ8N9E0 248 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 NSUN6Q8TEA1 469 aaKnown RBP15.07■□□□□ 0
TIMP1-202ENST00000377017 IPO9Q96P70 1041 aaKnown RBP15.07■□□□□ 0
TIMP1-202ENST00000377017 APBA2Q99767 749 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 GJB4Q9NTQ9 266 aa15.07■□□□□ 0
TIMP1-202ENST00000377017 BIN2Q9UBW5 565 aaPredicted RBP15.07■□□□□ 0
TIMP1-202ENST00000377017 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 STX6O43752 255 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 PGK2P07205 417 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 HOXC6P09630 235 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 CLK2P49760 499 aaKnown RBP15.06■□□□□ 0
TIMP1-202ENST00000377017 NPY5RQ15761 445 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 ARHGEF16Q5VV41 709 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 JAKMIP3Q5VZ66 844 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 MCTP1Q6DN14 999 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
TIMP1-202ENST00000377017 RMDN3Q96TC7 470 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
TIMP1-202ENST00000377017 SRRDQ9UH36 339 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 PCDHA6Q9UN73 950 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 PCDHA8Q9Y5H6 950 aa15.06■□□□□ 0
TIMP1-202ENST00000377017 LCTP09848 1927 aa15.05■□□□□ 0
TIMP1-202ENST00000377017 ASB14A6NK59 587 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms