RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TRIM65Q6PJ69 517 aa24.37■■□□□ 1.49
RNF39-202ENST00000376751 PRMT6Q96LA8 375 aaPredicted RBP24.37■■□□□ 1.49
RNF39-202ENST00000376751 PANX2Q96RD6 677 aa24.37■■□□□ 1.49
RNF39-202ENST00000376751 VPS16Q9H269 839 aa24.37■■□□□ 1.49
RNF39-202ENST00000376751 BLOC1S4Q9NUP1 217 aa24.37■■□□□ 1.49
RNF39-202ENST00000376751 LRWD1Q9UFC0 647 aa24.37■■□□□ 1.49
RNF39-202ENST00000376751 ATF5Q9Y2D1 282 aaPredicted RBP24.37■■□□□ 1.49
RNF39-202ENST00000376751 SPAG1Q07617 926 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 RRP1BQ14684 758 aaKnown RBP24.36■■□□□ 1.49
RNF39-202ENST00000376751 ANKRD7Q92527 254 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 PSTPIP2Q9H939 334 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 ITIH6Q6UXX5 1313 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 N4BP3O15049 544 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 GYPCP04921 128 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 ASIC1P78348 528 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 TMEM179Q6ZVK1 233 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 CPLX3Q8WVH0 158 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 CALML4Q96GE6 196 aa24.36■■□□□ 1.49
RNF39-202ENST00000376751 NUP88Q99567 741 aaPredicted RBP24.36■■□□□ 1.49
RNF39-202ENST00000376751 RGS17Q9UGC6 210 aaPredicted RBP24.36■■□□□ 1.49
RNF39-202ENST00000376751 COL4A5P29400 1685 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 H7C1D1 291 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 FANCGO15287 622 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 MFAP3LO75121 409 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 MRPL12P52815 198 aaKnown RBP24.35■■□□□ 1.49
RNF39-202ENST00000376751 MTF1Q14872 753 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 CDC37Q16543 378 aaPredicted RBP24.35■■□□□ 1.49
RNF39-202ENST00000376751 ABCB5Q2M3G0 1257 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 PPP4R3AQ6IN85 833 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 TTI2Q6NXR4 508 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 PPFIBP1Q86W92 1011 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 HAS1Q92839 578 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 GJA10Q969M2 543 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 NUDT12Q9BQG2 462 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 PDCL3Q9H2J4 239 aa24.35■■□□□ 1.49
RNF39-202ENST00000376751 ENTPD3O75355 529 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 SEMA3FQ13275 785 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 TMEM266Q2M3C6 531 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 CC2D2BQ6DHV5 1058 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 SUPT20HQ8NEM7 779 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 EXOC1Q9NV70 894 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L15C9J2P7 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L13C9JLJ4 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L11C9JVI0 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L18D6R9N7 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L22D6RA61 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L17D6RBQ6 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L19D6RCP7 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L20D6RJB6 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 FCER1AP12319 257 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 CASP14P31944 242 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 FXR1P51114 621 aaKnown RBP eCLIP24.34■■□□□ 1.49
RNF39-202ENST00000376751 ETF1P62495 437 aaKnown RBP24.34■■□□□ 1.49
RNF39-202ENST00000376751 PDE4DQ08499 809 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L24Q0WX57 530 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 STK4Q13043 487 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 MCM6Q14566 821 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 USP17L6PQ6QN14 398 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 MAP7D2Q96T17 732 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 DUSP9Q99956 384 aaKnown RBP24.34■■□□□ 1.49
RNF39-202ENST00000376751 DESI2Q9BSY9 194 aa24.34■■□□□ 1.49
RNF39-202ENST00000376751 DDX25Q9UHL0 483 aaKnown RBP24.34■■□□□ 1.49
RNF39-202ENST00000376751 ZNF215Q9UL58 517 aaPredicted RBP24.34■■□□□ 1.49
RNF39-202ENST00000376751 COL2A1P02458 1487 aaPredicted RBP24.34■■□□□ 1.49
RNF39-202ENST00000376751 SOWAHDA6NJG2 315 aa24.33■■□□□ 1.49
RNF39-202ENST00000376751 PSMA7O14818 248 aa24.33■■□□□ 1.49
RNF39-202ENST00000376751 ZSCAN12O43309 604 aa24.33■■□□□ 1.49
RNF39-202ENST00000376751 SNAP25P60880 206 aa24.33■■□□□ 1.49
RNF39-202ENST00000376751 STIM1Q13586 685 aa24.33■■□□□ 1.49
RNF39-202ENST00000376751 PCDHA1Q9Y5I3 950 aa24.33■■□□□ 1.49
RNF39-202ENST00000376751 F5H6K3 240 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 NDUFB10O96000 172 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 GH2P01242 217 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 KLRC3Q07444 240 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 SYCP1Q15431 976 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 POTEAQ6S8J7 498 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 CREBRFQ8IUR6 639 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 HPS3Q969F9 1004 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 TRIM47Q96LD4 638 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 STK17AQ9UEE5 414 aa24.33■■□□□ 1.48
RNF39-202ENST00000376751 MYMKA6NI61 221 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 RNF225M0QZC1 329 aaPredicted RBP24.32■■□□□ 1.48
RNF39-202ENST00000376751 PDIA5Q14554 519 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 TMEM119Q4V9L6 283 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 RAD9BQ6WBX8 426 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 KCNK18Q7Z418 384 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 GMCL1P1Q8NEA9 526 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 THAP9Q9H5L6 903 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 L2HGDHQ9H9P8 463 aa24.32■■□□□ 1.48
RNF39-202ENST00000376751 KIAA0895Q8NCT3 520 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 ANKRD20A12PQ8NF67 263 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 SNX29Q8TEQ0 813 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 DHTKD1Q96HY7 919 aaPredicted RBP24.31■■□□□ 1.48
RNF39-202ENST00000376751 CSRNP1Q96S65 589 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 P2RX7Q99572 595 aaKnown RBP24.31■■□□□ 1.48
RNF39-202ENST00000376751 SRRTQ9BXP5 876 aaKnown RBP24.31■■□□□ 1.48
RNF39-202ENST00000376751 DNAI1Q9UI46 699 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 PHLPP2Q6ZVD8 1323 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 TUBB4AP04350 444 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 TAL1P17542 331 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms