RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TJAP1Q5JTD0 557 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 MAEAQ7L5Y9 396 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 CRLF3Q8IUI8 442 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 SH3GL3Q99963 347 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 L3MBTL1Q9Y468 752 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 GAS7O60861 476 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 PMLP29590 882 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 FSCBQ5H9T9 825 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 RNF169Q8NCN4 708 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 THOC5Q13769 683 aaKnown RBP12.61□□□□□ -0.39
VPS13A-205ENST00000376636 SESN1Q9Y6P5 492 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 IQANK1A0A1B0GTG1 560 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 MYOCDQ8IZQ8 938 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 ICA1LQ8NDH6 482 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 PHF21AQ96BD5 680 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 MAGEF1Q9HAY2 307 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
VPS13A-205ENST00000376636 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 AOX1Q06278 1338 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 H7C0C1 242 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 ATP5OP48047 213 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 IFNAR2P48551 515 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-205ENST00000376636 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 NIP7Q9Y221 180 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS13A-205ENST00000376636 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 PAMP19021 973 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 STAT2P52630 851 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 GNPTABQ3T906 1256 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 CHGBP05060 677 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 NLRX1Q86UT6 975 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 H0Y626 953 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 DAB1O75553 588 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 TRIM16O95361 564 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 ZNF280CQ8ND82 737 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 METTL13Q8N6R0 699 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
VPS13A-205ENST00000376636 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 INTUQ9ULD6 942 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 BUB1O43683 1085 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 ABL1P00519 1130 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 TAC1P20366 129 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 DNAAF3Q8N9W5 541 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 DDX39AO00148 427 aaKnown RBP12.6□□□□□ -0.39
VPS13A-205ENST00000376636 DDIT3P35638 169 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 EXOC1LA0A1B0GW35 172 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 YWHAHQ04917 246 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-205ENST00000376636 ASPSCR1Q9BZE9 553 aa12.6□□□□□ -0.39
VPS13A-205ENST00000376636 TOM1L1O75674 476 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 TMED2Q15363 201 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 EXOC4Q96A65 974 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 SLC12A6Q9UHW9 1150 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 H7C1D1 291 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CEP55Q53EZ4 464 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CATSPER1Q8NEC5 780 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 KDRP35968 1356 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 LRMPQ12912 555 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 FRA10AC1Q70Z53 315 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CHMLP26374 656 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CUL1Q13616 776 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 FMO2Q99518 471 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 PLEKHA4Q9H4M7 779 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 STOML1Q9UBI4 398 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 MYO1FO00160 1098 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 SPOPLQ6IQ16 392 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 XAGE3Q8WTP9 111 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 DEAF1O75398 565 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CYP2J2P51589 502 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 PTK2Q05397 1052 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 RWDD2BP57060 319 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 ADCY2Q08462 1091 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CAPRIN1Q14444 709 aaKnown RBP12.59□□□□□ -0.39
VPS13A-205ENST00000376636 MRPS26Q9BYN8 205 aaKnown RBP12.59□□□□□ -0.39
VPS13A-205ENST00000376636 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 CABP7Q86V35 215 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 SGO2Q562F6 1265 aa12.59□□□□□ -0.39
VPS13A-205ENST00000376636 ECEL1O95672 775 aa12.58□□□□□ -0.39
VPS13A-205ENST00000376636 IGBP1P78318 339 aa12.58□□□□□ -0.39
VPS13A-205ENST00000376636 KIF2CQ99661 725 aa12.58□□□□□ -0.39
VPS13A-205ENST00000376636 KLC2Q9H0B6 622 aa12.58□□□□□ -0.39
VPS13A-205ENST00000376636 STMN3Q9NZ72 180 aa12.58□□□□□ -0.39
VPS13A-205ENST00000376636 GYG2O15488 501 aa12.58□□□□□ -0.4
VPS13A-205ENST00000376636 PYGMP11217 842 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms