RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 TRPV6Q9H1D0 765 aa17.6■□□□□ 0.41
CLCN6-204ENST00000376491 IL23AQ9NPF7 189 aa17.6■□□□□ 0.41
CLCN6-204ENST00000376491 CCDC171Q6TFL3 1326 aa17.6■□□□□ 0.41
CLCN6-204ENST00000376491 PTPDC1A2A3K4 754 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 TRIM6-TRIM34B2RNG4 842 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 ZEB2O60315 1214 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 SNHG28P0DPA3 235 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 ZNF543Q08ER8 600 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 AKNAD1Q5T1N1 836 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 PSRC1Q6PGN9 363 aaPredicted RBP17.59■□□□□ 0.41
CLCN6-204ENST00000376491 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 HERVK_113Q902F9 699 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 HIPK3Q9H422 1215 aa17.59■□□□□ 0.41
CLCN6-204ENST00000376491 CXXC1Q9P0U4 656 aaPredicted RBP17.59■□□□□ 0.41
CLCN6-204ENST00000376491 ADD3Q9UEY8 706 aaKnown RBP17.59■□□□□ 0.41
CLCN6-204ENST00000376491 VCANP13611 3396 aa17.58■□□□□ 0.41
CLCN6-204ENST00000376491 RBM47A0AV96 593 aaKnown RBP17.58■□□□□ 0.4
CLCN6-204ENST00000376491 CALML3P27482 149 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 MFSD6Q6ZSS7 791 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 RILPL2Q969X0 211 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 VWCEQ96DN2 955 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 TTC14Q96N46 770 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 NOC4LQ9BVI4 516 aaKnown RBP17.58■□□□□ 0.4
CLCN6-204ENST00000376491 WDR11Q9BZH6 1224 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 SCN10AQ9Y5Y9 1956 aa17.58■□□□□ 0.4
CLCN6-204ENST00000376491 NEDD4P46934 1319 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 LOC102724159A0A0B4J2E5 919 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
CLCN6-204ENST00000376491 SDSP20132 328 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 CCL23P55773 120 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 RPS6P62753 249 aaKnown RBP17.57■□□□□ 0.4
CLCN6-204ENST00000376491 PWP2Q15269 919 aaKnown RBP17.57■□□□□ 0.4
CLCN6-204ENST00000376491 RNF207Q6ZRF8 634 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 ZKSCAN3Q9BRR0 538 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 SEZ6LQ9BYH1 1024 aa17.57■□□□□ 0.4
CLCN6-204ENST00000376491 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 WDR19Q8NEZ3 1342 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 SCN5AQ14524 2016 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 FGBP02675 491 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 PLEKHM2Q8IWE5 1019 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 ALDH8A1Q9H2A2 487 aaPredicted RBP17.56■□□□□ 0.4
CLCN6-204ENST00000376491 CPVLQ9H3G5 476 aa17.56■□□□□ 0.4
CLCN6-204ENST00000376491 GOLGA8HP0CJ92 632 aa17.55■□□□□ 0.4
CLCN6-204ENST00000376491 EDNRBP24530 442 aa17.55■□□□□ 0.4
CLCN6-204ENST00000376491 PURAQ00577 322 aaKnown RBP17.55■□□□□ 0.4
CLCN6-204ENST00000376491 OTOP2Q7RTS6 562 aa17.55■□□□□ 0.4
CLCN6-204ENST00000376491 COPS5Q92905 334 aa17.55■□□□□ 0.4
CLCN6-204ENST00000376491 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
CLCN6-204ENST00000376491 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
CLCN6-204ENST00000376491 MYH6P13533 1939 aa17.55■□□□□ 0.4
CLCN6-204ENST00000376491 IGHDP01880 384 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 MYL3P08590 195 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 CYP2C9P11712 490 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 OR6J1Q8NGC5 347 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 ESR2Q92731 530 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 SCLYQ96I15 445 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 OSBPL3Q9H4L5 887 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
CLCN6-204ENST00000376491 PRDM12Q9H4Q4 367 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 POLR3EQ9NVU0 708 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 PNMA2Q9UL42 364 aa17.54■□□□□ 0.4
CLCN6-204ENST00000376491 YBX2Q9Y2T7 364 aaKnown RBP17.54■□□□□ 0.4
CLCN6-204ENST00000376491 PDE4DQ08499 809 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 ADGRE1Q14246 886 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 DGKHQ86XP1 1220 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 DNERQ8NFT8 737 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 PPP1R13LQ8WUF5 828 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 TBC1D5Q92609 795 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 NKX2-4Q9H2Z4 354 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 PRDM6Q9NQX0 595 aa17.53■□□□□ 0.4
CLCN6-204ENST00000376491 TRIP12Q14669 1992 aaPredicted RBP17.53■□□□□ 0.4
CLCN6-204ENST00000376491 TNKSO95271 1327 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 ZNF213O14771 459 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 KDM4AO75164 1064 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 ARIH2O95376 493 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 CPT1AP50416 773 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.4
CLCN6-204ENST00000376491 PPP2R5BQ15173 497 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 RAB30Q15771 203 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 USH1GQ495M9 461 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 GPATCH4Q5T3I0 446 aaKnown RBP17.52■□□□□ 0.4
CLCN6-204ENST00000376491 CWC27Q6UX04 472 aaKnown RBP17.52■□□□□ 0.4
CLCN6-204ENST00000376491 TET1Q8NFU7 2136 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 MTG1Q9BT17 334 aaPredicted RBP17.52■□□□□ 0.4
CLCN6-204ENST00000376491 MTIF3Q9H2K0 278 aaKnown RBP17.52■□□□□ 0.4
CLCN6-204ENST00000376491 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
CLCN6-204ENST00000376491 MSRAQ9UJ68 235 aa17.52■□□□□ 0.4
CLCN6-204ENST00000376491 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
CLCN6-204ENST00000376491 B4E1Z4 1266 aa17.51■□□□□ 0.39
CLCN6-204ENST00000376491 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLCN6-204ENST00000376491 RABGGTBP53611 331 aa17.51■□□□□ 0.39
CLCN6-204ENST00000376491 NUCB1Q02818 461 aa17.51■□□□□ 0.39
CLCN6-204ENST00000376491 AAMPQ13685 434 aa17.51■□□□□ 0.39
CLCN6-204ENST00000376491 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
CLCN6-204ENST00000376491 RPUSD2Q8IZ73 545 aaKnown RBP17.51■□□□□ 0.39
CLCN6-204ENST00000376491 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms