RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 LRRC8CQ8TDW0 803 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 HVCN1Q96D96 273 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ANAPC5Q9UJX4 755 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ANGPTL3Q9Y5C1 460 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 FANCBQ8NB91 859 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ALKBH8Q96BT7 664 aaKnown RBP14.97□□□□□ -0.01
COL4A1-201ENST00000375820 SNAP25P60880 206 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 SUPT20HQ8NEM7 779 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 ATP6V1E2Q96A05 226 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
COL4A1-201ENST00000375820 PPFIA4O75335 1185 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 ACTN1P12814 892 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 PDE1BQ01064 536 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 CROCCP2Q86T23 111 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 DSCC1Q9BVC3 393 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 VCX3AQ9NNX9 186 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 WDR91A4D1P6 747 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 SLCO1A2P46721 670 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 AS3MTQ9HBK9 375 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 UBN1Q9NPG3 1134 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 INTUQ9ULD6 942 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 ZMYM6O95789 1325 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 ADORA1P30542 326 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 ALDH1B1P30837 517 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 KCNQ4P56696 695 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 CYP4F22Q6NT55 531 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 RINT1Q6NUQ1 792 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 PI4K2BQ8TCG2 481 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 NUB1Q9Y5A7 615 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 GSPT1P15170 499 aaKnown RBP14.96□□□□□ -0.01
COL4A1-201ENST00000375820 CCT5P48643 541 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 ZNF445P59923 1031 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.01
COL4A1-201ENST00000375820 PCDHA7Q9UN72 937 aa14.96□□□□□ -0.01
COL4A1-201ENST00000375820 CASP14P31944 242 aa14.96□□□□□ -0.02
COL4A1-201ENST00000375820 NSFP46459 744 aaKnown RBP14.96□□□□□ -0.02
COL4A1-201ENST00000375820 PHEXP78562 749 aa14.96□□□□□ -0.02
COL4A1-201ENST00000375820 TMED2Q15363 201 aa14.96□□□□□ -0.02
COL4A1-201ENST00000375820 WHAMMP3Q1A5X7 153 aa14.96□□□□□ -0.02
COL4A1-201ENST00000375820 ODR4Q5SWX8 454 aa14.96□□□□□ -0.02
COL4A1-201ENST00000375820 ZNF215Q9UL58 517 aaPredicted RBP14.96□□□□□ -0.02
COL4A1-201ENST00000375820 ZFYVE9O95405 1425 aa14.96□□□□□ -0.02
COL4A1-201ENST00000375820 GOLGA8KD6RF30 607 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 HSPD1P10809 573 aaKnown RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 SCG2P13521 617 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 GDAP1Q8TB36 358 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 CFAP36Q96G28 342 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 RPS6KC1Q96S38 1066 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 GDF11O95390 407 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 ZBTB41Q5SVQ8 909 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 C7orf31Q8N865 590 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 FAM149B1Q96BN6 582 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 HIP1RO75146 1068 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 S100BP04271 92 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 ARHGAP4P98171 946 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 PDCD7Q8N8D1 485 aaKnown RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 TLR3O15455 904 aaKnown RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 LRRC8AQ8IWT6 810 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 MRPL11Q9Y3B7 192 aaKnown RBP14.95□□□□□ -0.02
COL4A1-201ENST00000375820 GNGT2O14610 69 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 SLFN12Q8IYM2 578 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
COL4A1-201ENST00000375820 INHBAP08476 426 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 PDE6AP16499 860 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 MAP2K2P36507 400 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 CHRNDQ07001 517 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 EXOC3L4Q17RC7 722 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 SLFN13Q68D06 897 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 TRPA1O75762 1119 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 RNF8O76064 485 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 FGAP02671 866 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 ASPHQ12797 758 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 FAM182BQ5T319 152 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 PPWD1Q96BP3 646 aaKnown RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 ZNF277Q9NRM2 450 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 A2MP01023 1474 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 NVLO15381 856 aaKnown RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 IRX4P78413 519 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 SCRN1Q12765 414 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 FAM133BQ5BKY9 247 aaKnown RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 SDCCAG3Q96C92 435 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 ZBBXA8MT70 800 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 GPC4O75487 556 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 ATP5JP18859 108 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 E2F5Q15329 346 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 PHLDB3Q6NSJ2 640 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 SCARA5Q6ZMJ2 495 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 RSRC2Q7L4I2 434 aaKnown RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 XPAP23025 273 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-201ENST00000375820 CDC25AP30304 524 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 PRPSAP1Q14558 356 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 EXT2Q93063 718 aa14.94□□□□□ -0.02
COL4A1-201ENST00000375820 CUL7Q14999 1698 aa14.93□□□□□ -0.02
COL4A1-201ENST00000375820 SART1O43290 800 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms