RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 KAZALD1Q96I82 304 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 NDST4Q9H3R1 872 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
VARS-215ENST00000375663 TTC26A0AVF1 554 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 ARHGEF35A5YM69 484 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
VARS-215ENST00000375663 IFT88Q13099 833 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 RDH13Q8NBN7 331 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 PPP1R14CQ8TAE6 165 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 PSTPIP2Q9H939 334 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 L2HGDHQ9H9P8 463 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 PLCB1Q9NQ66 1216 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
VARS-215ENST00000375663 PCDHA13Q9Y5I0 950 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 FTCDO95954 541 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 ALDH3A1P30838 453 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 ST3GAL1Q11201 340 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 NAA35Q5VZE5 725 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 TBCKQ8TEA7 893 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 BUB1BO60566 1050 aaPredicted RBP18.49■□□□□ 0.55
VARS-215ENST00000375663 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
VARS-215ENST00000375663 CLNS1AP54105 237 aaKnown RBP18.49■□□□□ 0.55
VARS-215ENST00000375663 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 PIGBQ92521 554 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 IMPG2Q9BZV3 1241 aa18.49■□□□□ 0.55
VARS-215ENST00000375663 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 KRT5P13647 590 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 VSNL1P62760 191 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 USH1GQ495M9 461 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 MFSD14BQ5SR56 506 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 MAEAQ7L5Y9 396 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 TRIM7Q9C029 511 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 RNF14Q9UBS8 474 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 DDX25Q9UHL0 483 aaKnown RBP18.48■□□□□ 0.55
VARS-215ENST00000375663 PIK3C2BO00750 1634 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 BCRP11274 1271 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 ANTXR2P58335 489 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 NNTQ13423 1086 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 SYNCQ9H7C4 482 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 MROH7-TTC4A0A0A0MT08 1334 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 UTYO14607 1347 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 ENAHQ8N8S7 591 aaPredicted RBP18.48■□□□□ 0.55
VARS-215ENST00000375663 GSG1L2A8MUP6 293 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 EXOC3L4Q17RC7 722 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 RIC8AQ9NPQ8 531 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 HDAC6Q9UBN7 1215 aa18.48■□□□□ 0.55
VARS-215ENST00000375663 TMEM94Q12767 1356 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 A0A1B0GTH6 734 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 CRKLP46109 303 aaKnown RBP18.47■□□□□ 0.55
VARS-215ENST00000375663 PPP2R5EQ16537 467 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 ERVV-1B6SEH8 477 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 SIK1P57059 783 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 EMBQ6PCB8 327 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 KIFAP3Q92845 792 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 MTA3Q9BTC8 594 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 KIAA1024Q9UPX6 916 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 MAGEA9P43362 315 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 CLUL1Q15846 466 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 USP49Q70CQ1 688 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 UHMK1Q8TAS1 419 aaKnown RBP18.47■□□□□ 0.55
VARS-215ENST00000375663 CPDO75976 1380 aa18.47■□□□□ 0.55
VARS-215ENST00000375663 RCAN1P53805 252 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 ALS2CLQ60I27 953 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 VSIG1Q86XK7 387 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 STIM2Q9P246 746 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 STK17AQ9UEE5 414 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 USP17L8P0C7I0 530 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 MXRA7P84157 204 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 PRR16Q569H4 304 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 GSPT2Q8IYD1 628 aaKnown RBP18.46■□□□□ 0.55
VARS-215ENST00000375663 MGARPQ8TDB4 240 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.46■□□□□ 0.55
VARS-215ENST00000375663 CCNL1Q9UK58 526 aaPredicted RBP18.46■□□□□ 0.55
VARS-215ENST00000375663 STK24Q9Y6E0 443 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 ZNF804BA4D1E1 1349 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 NR2F2P24468 414 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 ATP11AP98196 1134 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 METTL14Q9HCE5 456 aaKnown RBP18.46■□□□□ 0.55
VARS-215ENST00000375663 HDAC9Q9UKV0 1011 aa18.46■□□□□ 0.55
VARS-215ENST00000375663 ANO9A1A5B4 782 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 EIF3CLB5ME19 914 aaKnown RBP18.45■□□□□ 0.54
VARS-215ENST00000375663 CYP2J2P51589 502 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 TPH2Q8IWU9 490 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 IGDCC4Q8TDY8 1250 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 EIF3CQ99613 913 aaKnown RBP18.45■□□□□ 0.54
VARS-215ENST00000375663 COL4A3BPQ9Y5P4 624 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 GGCXP38435 758 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 PDIA6Q15084 440 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 RBM17Q96I25 401 aaKnown RBP18.45■□□□□ 0.54
VARS-215ENST00000375663 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 SUSD4Q5VX71 490 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms