RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SRLQ86TD4 932 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 SLITRK6Q9H5Y7 841 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 MAP3K4Q9Y6R4 1608 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 DISP1Q96F81 1524 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 COG1Q8WTW3 980 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 KAT6BQ8WYB5 2073 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 ECEL1O95672 775 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 CFAP61Q8NHU2 1237 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 AATFQ9NY61 560 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTCH1-204ENST00000375290 ABCA9Q8IUA7 1624 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 MRFAP1Q9Y605 127 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 ERVK-7P63135 1459 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 CUL4BQ13620 913 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 TSGA10IPQ3SY00 556 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 OTUD6AQ7L8S5 288 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 PFASO15067 1338 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 ORC6Q9Y5N6 252 aa11.1□□□□□ -0.63
PTCH1-204ENST00000375290 E7ENQ6 273 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 EXOC3O60645 756 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 KRT5P13647 590 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 IFNAR1P17181 557 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 ABCA8O94911 1581 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 SPHKAPQ2M3C7 1700 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 FAM207AQ9NSI2 230 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-204ENST00000375290 TAF11Q15544 211 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-204ENST00000375290 SLC35F6Q8N357 371 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 C17orf53Q8N3J3 647 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-204ENST00000375290 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 SCG2P13521 617 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 GEN1Q17RS7 908 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 ATP5J2-PTCD1G3V325 749 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 SETDB2Q96T68 719 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 VPS37BQ9H9H4 285 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-204ENST00000375290 ACTN1P12814 892 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 PRR16Q569H4 304 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 LRIG3Q6UXM1 1119 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 STK38LQ9Y2H1 464 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 SMAPO00193 183 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 MFAP3LO75121 409 aa11.09□□□□□ -0.63
PTCH1-204ENST00000375290 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.63
PTCH1-204ENST00000375290 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 HSPD1P10809 573 aaKnown RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 SATB2Q9UPW6 733 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 NCOA3Q9Y6Q9 1424 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 MRPS35P82673 323 aaKnown RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 CRYMQ14894 314 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 TRIM68Q6AZZ1 485 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 SCYL3Q8IZE3 742 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 TMCO5AQ8N6Q1 288 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 P2RX5Q93086 422 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 ZMYND12Q9H0C1 365 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 GFPT2O94808 682 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 BZW1Q7L1Q6 419 aaKnown RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 GSTA2P09210 222 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 HOXC9P31274 260 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 NSFP46459 744 aaKnown RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 IGBP1P78318 339 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 EYA1Q99502 592 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 TMEM206Q9H813 350 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 MEFVO15553 781 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 GSDMBQ8TAX9 411 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 NSMCE1Q8WV22 266 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 RABEP2Q9H5N1 569 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 C1orf112Q9NSG2 853 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 EXOC3L4Q17RC7 722 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
PTCH1-204ENST00000375290 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 INHBAP08476 426 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 ATP1A2P50993 1020 aa11.08□□□□□ -0.64
PTCH1-204ENST00000375290 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 B4E1Z4 1266 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 SPATA5Q8NB90 893 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 LARP4BQ92615 738 aaKnown RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 SPECC1L-ADORA2AF8WAN1 911 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 MMP1P03956 469 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 BEND3Q5T5X7 828 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 LRGUKQ96M69 825 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms