RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 MYO7AQ13402 2215 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 TMEM221A6NGB7 291 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 M0R296 226 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 CYP2D6P10635 497 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 CNKSR3Q6P9H4 555 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 AFAP1L1Q8TED9 768 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 ATOH1Q92858 354 aaPredicted RBP11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 SAMD11Q96NU1 681 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 ANTXR1Q9H6X2 564 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 VTA1Q9NP79 307 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
HLA-DOA-202ENST00000374813 SURF6O75683 361 aaKnown RBP11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 MYL3P08590 195 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 IKBKEQ14164 716 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 TKFCQ3LXA3 575 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 FBXL6Q8N531 539 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 CCDC8Q9H0W5 538 aaPredicted RBP11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 PTPRSQ13332 1948 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 RAD50Q92878 1312 aa11.24□□□□□ -0.61
HLA-DOA-202ENST00000374813 SOWAHBA6NEL2 793 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 NDUFB10O96000 172 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 SELPP16109 830 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 PDE6AP16499 860 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 NUBP1P53384 320 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 DEFB103AP81534 67 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 FBXO16Q8IX29 292 aaPredicted RBP11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 NSUN3Q9H649 340 aaKnown RBP11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 CLDND1Q9NY35 253 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
HLA-DOA-202ENST00000374813 LOC102724159A0A0B4J2E5 919 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 PROB1E7EW31 1015 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 H3BNC9 293 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 CXCL10P02778 98 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 PTGS1P23219 599 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 POLA2Q14181 598 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 PWP2Q15269 919 aaKnown RBP11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 PTGISQ16647 500 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 EPC2Q52LR7 807 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 TCEAL5Q5H9L2 206 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 LCORLQ8N3X6 602 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
HLA-DOA-202ENST00000374813 STXBP3O00186 592 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 ID4P47928 161 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 GPM6BQ13491 265 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 LRRC8DQ7L1W4 858 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 OR6J1Q8NGC5 347 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 MORC4Q8TE76 937 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 SSH3Q8TE77 659 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 CHURC1Q8WUH1 139 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 MKL1Q969V6 931 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 TRERF1Q96PN7 1200 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 FAM86C1Q9NVL1 165 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 TLR7Q9NYK1 1049 aaKnown RBP11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
HLA-DOA-202ENST00000374813 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.62
HLA-DOA-202ENST00000374813 EPG5Q9HCE0 2579 aa11.21□□□□□ -0.62
HLA-DOA-202ENST00000374813 DNAH14Q0VDD8 3507 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 A6NJR5 290 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 MBTPS2O43462 519 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 LTBRP36941 435 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 ZXDAP98168 799 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 ATP8B2P98198 1209 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 GPNMBQ14956 572 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 CTC1Q2NKJ3 1217 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 TMEM63BQ5T3F8 832 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 FAM117BQ6P1L5 589 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 MKNK2Q9HBH9 465 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 CYP39A1Q9NYL5 469 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms